Rothia terrae: IDM49_05290
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Entry
IDM49_05290 CDS
T06818
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rter
Rothia terrae
Pathway
rter03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rter00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IDM49_05290 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rter03019
]
IDM49_05290 (orn)
03009 Ribosome biogenesis [BR:
rter03009
]
IDM49_05290 (orn)
Messenger RNA biogenesis [BR:
rter03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IDM49_05290 (orn)
Ribosome biogenesis [BR:
rter03009
]
Eukaryotic type
Pre-60S particles
RNases
IDM49_05290 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QNV38661
UniProt:
A0A7H2BG65
LinkDB
All DBs
Position
complement(1139268..1139891)
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AA seq
207 aa
AA seq
DB search
MSVSNERIVWIDCEMTGLSLENDALIEVAALVTDAELNILGDGVDVVIKPSAQAVDHMND
FVRNMHTESGLINELDAGLSMKDAQKQVLDYIKSYVPEAGKAQLAGNSIGTDKTFLVRDM
PELIDYLHYRVIDVSTIKELSRRWFPKALWNAPAKTGNHRALGDIRDSIDELRYYRETVF
VEAPGPDSETSQKIARKIAETRQELSS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtttctaacgaacgaattgtatggattgactgcgagatgaccggactctcgctg
gaaaatgatgcgctgattgaggttgccgcactggtgacagacgctgagctcaacattttg
ggcgacggagttgatgtggttatcaaaccctcagcccaagcggtggatcatatgaatgat
tttgtgcgcaatatgcacactgaatccggcttgattaatgagctggacgcgggcctgagc
atgaaagacgcccagaagcaggttcttgattacatcaagagctatgtacccgaagcaggc
aaagcgcagctcgccggtaattcgattggcaccgataagactttcttggtgcgcgatatg
cctgagttgattgattacctgcactaccgcgtcattgatgtttcaactatcaaggagctc
tcccgtcgctggttccccaaggctttgtggaatgctcctgctaaaaccggcaatcatcga
gctttgggtgatattcgcgattccattgatgagttgcgttactaccgtgaaactgttttc
gtcgaagctccgggcccagacagtgagacttctcagaaaattgcacgaaaaatcgctgaa
actcggcaggaacttagttcctag
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