Rothia terrae: IDM49_08275
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Entry
IDM49_08275 CDS
T06818
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rter
Rothia terrae
Pathway
rter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IDM49_08275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rter03019
]
IDM49_08275
03016 Transfer RNA biogenesis [BR:
rter03016
]
IDM49_08275
Enzymes [BR:
rter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IDM49_08275
Messenger RNA biogenesis [BR:
rter03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IDM49_08275
Transfer RNA biogenesis [BR:
rter03016
]
Prokaryotic type
tRNA degradation factors
IDM49_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
PGM_PMM_IV
S1_RRP5
PCB_OB
KH_KhpA-B
aRib
KH_SLS1_2
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QNV37236
UniProt:
A0A7H2BC40
LinkDB
All DBs
Position
complement(1804978..1807191)
Genome browser
AA seq
737 aa
AA seq
DB search
MEGPEIQFAEAIIDNGKFGKRTVRFETGRLAKQAAGSAMVYIDDETSMLSATAIGKQPRE
GFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTDAILTARLIDRPLRPAFKKGIRNEVQ
VVVTVLSIEPDEIYNTVAINAASCSTTLSGAPFAGPIGGVRVALIDGQWVAFPKHSQLEN
AVFDMAVAGRVITRADGTEDVAIMMVEAEATDNSWKLIKENGAVAPTEEIVAEGLEASKP
FIKALCQAQSDLKARAGKAELDLPFFGSHGDDVDAAVKEYASEKIVDVYSIAGKQEREIA
SENLQKEIIEALAGEGKEFEGRESEVNAAFNGLTKHTVRQRILTEQVRIDGRGLTDIRQL
TAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKLEQQLDSLHPVKAKRYIHHYNFPPYST
GETGRVGSPKRREIGHGALAERALTPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCAST
LSLLNAGVPLRAPVAGIAMGLVSDEVNGETRYAALTDILGAEDALGDMDFKVAGTSEFVT
AIQLDTKLDGIPASVLAAALTQAREARLHILDVINAAIDAPDEMSDFAPRVISVNVPVSK
IGEVIGPKGKMINQIQEETGTDISIEDDGTVYIGATDGPSAEAARSAINAIANPQVPEVG
ERYLGTVVKTTTFGAFVSLTPGKDGLLHISELRKLNDGKRVDDVEDVVGVGQKVQVEITK
IDDRGKLSLAPVVAEEA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcccgaaattcagtttgcagaagcaatcattgacaacggtaagtttggtaag
cgtaccgttcgctttgaaaccggtcgtttggctaagcaggcagctggctcagcaatggtt
tacattgacgatgaaacctcaatgctttcagctaccgctattggtaagcagccccgcgaa
ggcttcgacttcttcccgctcaccgttgacgttgaagagcgtatgtacgcagccggtaaa
attcccggctcattcttccgtcgtgaaggacgcccctcaaccgatgcgatcctgaccgcg
cgtctgattgaccgccccctgcgtcctgccttcaagaagggtattcgcaacgaggtgcag
gttgttgttaccgtgctctccatcgagcccgatgaaatctacaacaccgtagcaatcaac
gcggcatcatgctccaccactctgtcaggcgcacctttcgcaggacccattggtggcgtt
cgcgttgctttgattgatggtcagtgggttgctttccccaagcactcacagcttgaaaac
gctgtatttgacatggctgtcgctggccgcgtcattacccgtgctgacggcactgaagac
gttgcaatcatgatggttgaagcagaagcaaccgataactcatggaagctcatcaaggaa
aacggtgcagtagcgcctaccgaagaaatcgttgctgagggtcttgaagcatcaaagccc
ttcatcaaggcactgtgccaggcacagtcagacctcaaggctcgcgctggcaaggctgaa
ctggatctgcccttcttcggctcacacggtgatgacgttgatgcggccgttaaggaatac
gcatcagagaaaatcgttgatgtttactccatcgcaggtaagcaggagcgcgaaatcgca
tccgagaacctgcagaaggaaatcatcgaggctcttgccggtgaaggcaaggagttcgaa
ggacgcgagtctgaggttaatgctgcattcaatggcttgaccaagcacaccgttcgtcag
cgcatcctcaccgagcaggtacgtattgacggtcgcggtctgaccgacatccgtcagctc
accgctgaggttgaggttctgcctcgcgtacacggttcagcaatcttcgagcgtggcgaa
acccagattatgggtgttaccaccttgaacatgctcaagctcgaacagcagctggattca
ctgcaccctgtcaaggctaagcgctacatccaccactacaacttcccgccctactcaacc
ggtgaaaccggacgcgtgggctcacccaagcgtcgcgaaatcggccacggtgctctcgct
gagcgcgctttgactccggttctgccttcacgtgaggaattcccttacgcgattcgccag
gtgtcagaagctctgggctcaaacggctcaacctcgatgggttcagtttgtgcatcaacc
ctgtcactgctcaacgctggtgtgcccctgcgcgcgcccgttgcaggtatcgcaatgggc
ttggtctcagacgaagttaacggcgaaacccgttacgcagctctgaccgatatcctcggt
gcagaagatgcactgggcgatatggacttcaaggtcgcaggtacttcagagttcgtcacc
gcaatccagctggacaccaagcttgacggtatccccgcatccgttctggccgcagcactg
acccaggcacgcgaagcacgtttgcacatccttgacgttatcaatgctgcaattgacgct
ccggatgagatgagcgacttcgcaccgcgcgttatctcagtgaacgttcctgtttcaaag
atcggtgaggttatcggccccaagggtaagatgatcaaccagattcaggaagaaaccggc
accgacatcagcatcgaggacgacggcaccgtttacatcggcgcaaccgatggtccttca
gctgaggctgcccgttcagcgattaacgctatcgctaacccgcaggtacctgaggtcggc
gagcgttacttgggcactgttgttaagaccaccactttcggtgcgtttgtgtcgttgact
ccgggcaaggacggcctgttgcatatttcagagctgcgtaagctcaacgatggcaagcgt
gtagatgacgttgaagacgttgttggcgttggccagaaggttcaggttgagatcaccaag
attgatgatcgtggcaagctctcactggcacccgttgttgctgaagaagcataa
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integrated database retrieval system
