Ruoffia tabacinasalis: VQP54_00230
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Entry
VQP54_00230 CDS
T10899
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
rtf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VQP54_00230
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Gene cluster
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NCBI-ProteinID:
WWL40397
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Position
32852..35221
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AA seq
789 aa
AA seq
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MMFSVSNEKIFDTLEFDKVRQRIKQYTQTELAQSKIANMKPSNNYETIQKWQDETEQSLG
LLLQDRLIPVPRLRSLDQPLKRLELGASLNGRELAEVGKLLTSTKQVIQFFEILAEDEKF
FPALQDWVDRCIHLPEVEKLIHNAIDEDGSVLSSASSQLASIRRNQSNTEQQVRNQLNQI
LKSRANQLTDTLITIRNGRYVVPVKAEYRNQMGGTVHDQSSSGQTLYMEPQSVVNLNNRL
AELKVAERKEIERILDEISQSLMPYTNEIRTNQEMLAQLDFIQARAGYSREIDATKPILS
KDLIVALWQARHPLIASKDIVANDILLGEEYKALIITGPNTGGKTILLKTLGLLHLMGQS
GLHIPAEAGSQIGVFDNVYADIGDEQSIEQSLSTFSSHMTNNVRIINDATHESLVLFDEL
GSGTDPQEGAALAMAILEHFRKMGTTIMATTHYPELKLYANDAKDTINASMEFNSDTLSP
TYRLLIGVPGRSNALEISKRLGLPDAILQTAQEGVSRDDQSINEMVANLEYERRSAEQDH
MKAEKFLDDAEQLHKDLRHEYNRWLEQKSKIVEKAKQDANELVRDKQEEAEKLLSEIREL
QLEQGQSNTIKEHVLIDKRSSFDDLKLPEELKKNKVLKRAKEKKKLKPGDDVEVLSYGQR
GSIVEQSGKDEYVVQMGILKMKIAEKDLEPLKKVEKPTKVNVQRNVGSKVKTTLDLRGQR
YDAGLSKLEEYLDSALLSNHPMVTIIHGKGTGALRNGVQKALKEHPQVDRFEYSPPNAGG
DGSTIVYFK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttctgtgagtaatgagaagatttttgacacattagaattcgacaaagtacgt
caacgtatcaaacaatatactcaaacagaacttgctcagagtaagatagctaatatgaaa
ccatcgaataattacgaaacgattcaaaagtggcaggatgagactgagcaatcactaggt
ctattgttacaagatcgtcttattccggtaccacggttacgctcattggatcaacctttg
aagagattagaattaggtgctagtctcaatggtagagaactcgcagaagttggtaaattg
ttaacgtcaacgaagcaagtcattcaattctttgagattttagcggaagatgaaaagttt
ttcccggcattacaagactgggtggatcgatgtattcatcttccagaagttgagaaacta
attcataatgccattgatgaagatggtagtgtcttatcatcggcatcgagtcaattagca
tctataagaagaaatcaatccaatactgaacaacaagtgcgtaatcaattgaatcaaatt
ttaaaaagccgtgcgaaccaattaacggatactttaattacgattcgtaacggacgctac
gttgtccctgtgaaagcagagtatcggaaccaaatgggcggaacggtccacgatcagagt
agctctggacagacattatatatggaaccacaaagtgtggttaatttaaataaccgttta
gccgaattaaaagtagctgagcgtaaagaaatcgaacggattctggatgaaatttcgcaa
agcttaatgccgtatacaaatgaaattcgaacaaatcaagagatgttagcccaattagac
tttattcaagcaagagcagggtatagccgtgagattgatgctactaagccaatcttatca
aaggatttaattgttgccttatggcaggctagacacccacttattgcttcaaaagatatc
gttgcgaatgatattttacttggagaggaatataaagctttaattattactggaccgaat
acgggtggtaagacaatcttacttaagacgttggggctattgcatttgatgggacaatca
ggcttacatattccagctgaagctggcagtcaaattggggtgtttgataatgtttacgcc
gatattggtgacgagcagtcaatcgaacaaagtttaagtacgttctcaagtcatatgacg
aacaatgtaagaattattaatgatgcgacgcatgaatctttagttttattcgatgaatta
ggttccggaacggaccctcaagaaggtgctgcgttagcgatggcaattcttgaacatttt
agaaagatgggtacaaccattatggcaacgactcattatcctgaattgaaattatatgcc
aatgatgccaaggacacgattaatgcgagtatggaatttaattcggatacattatcaccg
acatatcgcttattaattggtgtcccaggtagatctaacgcactagaaatttctaaacga
ttggggctgccagatgcgattcttcaaactgctcaagaaggtgtgtctagagatgatcaa
tctattaacgaaatggttgcgaatcttgagtatgaacgccgttcggctgaacaagatcat
atgaaagcagagaagttcttagatgacgcagaacagttacataaagatttacgccacgaa
tataaccgttggttagagcaaaagagtaaaatcgttgaaaaagcgaaacaagatgccaat
gaactcgtgcgtgataaacaagaagaagcagaaaaactattaagtgaaataagagaatta
caactcgaacaagggcaaagtaataccattaaagaacatgtgcttattgataaacgctca
tcctttgatgacttgaaattgccagaagaacttaagaagaataaagtgcttaaacgtgcg
aaagagaagaagaaacttaaacctggtgatgacgtagaagttctttcatatggccaaaga
ggctctattgttgaacaatctggaaaagatgaatacgttgttcaaatgggaatattaaag
atgaaaattgccgagaaagatttagaaccacttaagaaagttgaaaaaccaacgaaagta
aacgtccaaagaaatgttggatcaaaagttaaaacgacactcgacttacgtggccaacgt
tatgatgcgggcttatccaaattagaagagtatttggactctgccttattatcaaatcat
ccaatggtaacaattattcatggtaaagggacaggtgctttaagaaacggtgttcaaaaa
gcacttaaagagcatccgcaagtcgatcgctttgaatactcaccacccaatgcaggtggc
gatgggtcaacgattgtttatttcaaataa
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