Ruoffia tabacinasalis: VQP54_00295
Help
Entry
VQP54_00295 CDS
T10899
Name
(GenBank) transglycosylase domain-containing protein
KO
K03693
penicillin-binding protein 1B
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf00550
Peptidoglycan biosynthesis
rtf01100
Metabolic pathways
rtf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VQP54_00295
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VQP54_00295
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtf01003
]
VQP54_00295
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtf01011
]
VQP54_00295
Glycosyltransferases [BR:
rtf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
VQP54_00295
Peptidoglycan biosynthesis and degradation proteins [BR:
rtf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
VQP54_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
R3H-assoc
Motif
Other DBs
NCBI-ProteinID:
WWL40409
LinkDB
All DBs
Position
complement(46523..50233)
Genome browser
AA seq
1236 aa
AA seq
DB search
MTDKYSKNNSNDSKFFDISFDEPIEDSHSNRKVPSEDTNESNNHPSSNKWDNFYDDFQEE
QQERYSDIRKESSSNSDFNKENTSPDNKFDPNKSSLMINRSIKRVQKLFSETNEAPSSTY
SDIKSAKSRDLNERAKRASLHTRNIPLRDDVIKRNIVRERRESELNDQLYSDKSGYKPVF
SLSDTEDNKEEPLNNNNSTHNASSDLPSPDRLLAERERRRKERITQLESMSSDKEIEDTY
HSMKSPSSSTVDDNHEDLNETENKPIVPVMPTPKVTEPDSLESDASVPDSESLIQTNDHD
DDEKQDITDDEVQSESKPDEHWSDSMDSIHVFNPDDEIVSAAPLGQSIENPAGTAALSGG
VAASTNFDAETDEEAIDPKQHKRQKKKDKYSLKNFSLKDKTFFGINVTFNVIKRLIMYLI
IIIVLAGALIGGTGIGFFANLVANTPPPTEREMAEQINRLEQQSTLYYADGNPIANVRTD
IVRSVANLNDISNHIVDGFIATEDEYFAEHPGIVPKALLRAVLQTFLTGSGTGGSTLTQQ
LVKQQMLTNDVTFFRKANEILLALRLENYFTKEEILTAYLNVSPFGRNNNGDNVAGIVKA
AEGIFGVAPEDVSLNQAAFLVGLPQDPYTYTPYDQNGEIRDEDSLQFGIERMNEVLYRMY
RAEKITKDEYETAIAYDITQDFLPPEPREEIRQSYLYQAVMNGAIEELMLLNIQDDGYSW
KQVYSDDEWYNEYYFAAEEQLRTGGYRVYSTIDKEIYDQLQESARAYEDQLGAVYDGVYT
DPETGLETYYVEEVQTGLVAIDNNTGAVLGFVAGTDFENNQIDHAFQMRRSPGSTIKPMA
VYGPAVENNIINPSTVIPDTAFVETYEDGSTWAPTNYGSVVSDTLMTARTALLRSDNIPA
VRIYDELRSQGIPVIDYLERMGFNTIDSYTEEDTNNLAFSLGGVTTGPTVLEETRAFSTF
ANGGEYVDGHYIERIEDAFGNVVFQQNEAPTRVFSEDTNYIMVDMLRDTMTEGTGRTANE
YMNVPGDWIAKSGISENSKDIWFIASTPSITIGSWIGYDSRYADYTIDVNDGFDRESVRS
QIYWSRIVNDLYELRPEIFGTEETFVQPDSVREQTVLEQTGTLPGSFTYNGNTYQLTGPT
KTELFKVSNPAPELTFDFMLGATEEDLARFWNNVRSTQEQQRRQQQQQQSSQESDESNEG
DESNQDESNEDETIENPDENNDSSDEEQPAESTPEG
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaatattcaaaaaataattctaatgatagtaagttttttgatatttcattt
gacgagcctattgaagatagccactcaaatcgtaaagttccgtctgaagatactaatgaa
tcaaataaccatccctcttctaataagtgggataacttttatgatgattttcaagaggaa
caacaagaacgctattctgatattcggaaggaaagctcttctaactcggactttaataaa
gaaaatacatcacccgataataaattcgatccgaataaatcaagtttaatgataaaccgg
tcaattaaacgggttcaaaagttatttagcgaaacaaatgaagcgccctcttctacttat
tcagatattaaatcagcgaaaagccgagatttaaatgaacgagccaaaagagcctcactt
cacacaaggaacattccgttaagagatgatgtaatcaaacgaaatattgtaagagaacgc
agagaatcagaactcaatgatcagctttattcagataaaagtggctataagccagtcttt
tcattatctgatacagaagataataaagaggagccgttgaataataataactcaacacac
aatgcgtcttctgatcttccaagtcctgatcgattattagctgaacgggaacgacgtcgt
aaagaaagaatcacacaacttgaaagtatgagttcggacaaagaaattgaagatacgtat
cactcaatgaagtcaccgtcatcttcaacagttgatgacaatcatgaggatttgaacgaa
actgagaacaaaccaattgttcccgtaatgcccacacctaaagttacagagcccgattca
cttgagagtgacgcgagtgtaccagattctgagtctcttattcaaacaaatgaccatgat
gatgatgaaaagcaagatataacagatgatgaagtgcaatctgaaagtaagccggatgaa
cactggtctgattcaatggattcaattcatgtgttcaaccctgatgatgaaatcgtatca
gccgctcccttaggtcaaagcattgaaaatcccgctgggactgcggcattatccggcgga
gttgctgcaagtacgaactttgatgctgaaactgatgaagaggcaatcgatcctaaacaa
cacaaacgtcaaaagaaaaaagataaatactcattaaaaaacttttcattaaaagataaa
acgttctttgggattaacgttactttcaatgttattaaacgattaattatgtatttaatt
attattatcgtcttagcgggagcactcattggtggtacaggtatcggattctttgcgaat
cttgtagcaaatacgccccctcctactgaacgtgagatggcagaacagattaatcgtcta
gaacaacaaagtacattgtactatgctgacggaaacccaattgccaatgtccgaacagat
attgttcgttctgttgcgaatctgaacgatatttctaatcatattgtcgacggttttatt
gcaactgaggatgaatattttgcagaacatccgggaattgttccaaaagcattgcttcgt
gctgttctccaaactttcttaacgggttcgggtacagggggttcaacgctaacacagcaa
ttagttaagcaacaaatgctaacaaatgatgtcactttctttagaaaagcgaatgaaatt
cttttagctttaagattagaaaactattttactaaagaagaaatattaacagcctactta
aacgtatctcctttcggtagaaataataacggagataatgtggctggtattgttaaagca
gctgagggcatttttggagtagcaccagaggatgtttctttaaatcaagcagcattctta
gtcggactcccccaagacccttatacatacactccttatgaccaaaatggagaaatccgt
gatgaagattctcttcaatttggtatcgaacgaatgaatgaagttttatatcgtatgtat
cgtgctgaaaaaattactaaagacgaatatgaaacagccattgcttatgatattactcaa
gacttcttgccacccgagccgcgtgaagaaattcgtcaatcatacttatatcaagcggtt
atgaatggtgccattgaggaacttatgttattaaacattcaagacgatggatactcatgg
aagcaagtctatagtgatgacgaatggtacaatgaatattactttgcggctgaagaacag
ttacgtactgggggttaccgcgtatattctacaatcgataaagaaatttatgaccaactc
caagagtcagctagagcctatgaggatcagcttggtgcggtttatgatggtgtctacact
gaccctgagactggtttggaaacatactatgtggaagaagttcaaactggtttagttgca
attgataacaatacaggtgcggtccttggattcgtagcgggaactgattttgagaataac
caaattgaccacgcattccaaatgcgtcgctcaccaggttcaaccattaaaccgatggcc
gtttatggacctgcggtggagaacaatatcattaacccttctacagttattccggataca
gcttttgtagaaacttatgaagatggttcaacttgggcaccaacgaactatggtagtgtt
gtgagtgatacattaatgaccgctcgaactgccctattaagatcagataatatacctgcg
gttcgtatttatgacgaattacgttctcaaggtattcctgtgattgattatctagagcgt
atgggcttcaatactattgactcatataccgaagaagatacaaacaacttagccttttct
ctaggtggtgtgactactggccctactgttctagaagaaacacgtgctttctcaacgttt
gctaacggtggagagtacgtagacggtcactatattgaacgtatcgaggatgcttttggt
aatgttgtattccaacaaaacgaagctccgacacgtgtattctcggaagatacaaactat
atcatggttgacatgttacgagacactatgaccgaaggtacaggacgtacagcgaatgaa
tacatgaatgtcccaggagattggattgcaaaatcaggtattagtgaaaactctaaagat
atttggtttattgcttctaccccatcgattacgattggatcttggattggatatgattca
agatatgctgattatacgattgatgttaatgatggttttgaccgcgaaagtgttcgtagt
cagatctattggtcccgaattgttaatgacctatacgaactccgtcctgaaatttttgga
acggaagaaacctttgttcaacctgattctgttcgtgaacaaaccgttctagaacaaaca
ggaactctacctggtagttttacatacaatggtaatacatatcaattaacaggaccgacg
aagacggaattattcaaggtttctaaccctgcccctgagttaacctttgactttatgtta
ggagcgactgaagaagatcttgctcgattctggaataatgttcgttcaactcaagaacaa
caaagaagacagcaacagcagcaacaatcatcccaagaaagtgatgaaagtaacgagggc
gacgaaagtaatcaggatgaatctaatgaagatgaaacaatagagaatccagatgaaaat
aatgactcaagtgatgaggaacaaccggcagaatcgacaccggaaggttaa
DBGET
integrated database retrieval system
