Ruoffia tabacinasalis: VQP54_00385
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Entry
VQP54_00385 CDS
T10899
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VQP54_00385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtf03400
]
VQP54_00385
Enzymes [BR:
rtf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VQP54_00385
DNA repair and recombination proteins [BR:
rtf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VQP54_00385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WWL40424
LinkDB
All DBs
Position
67647..68540
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AA seq
297 aa
AA seq
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MYIGSHVSMKGKEMLLGAAQEAASYGSNIFMIYTGAPQNTRRKEVSEFRIEEAKTFMKEN
GIEFFTVHAPYIVNLANTTKEGYHDFAMQFLREEIERVEAIGATQITMHPGAHVGAGAEV
GIKQIINGLNGVLTAEQSPQIALETMAGKGTEIGRNFEELAAIIDGVTFNEKLSITLDTC
HVYDAGYDLVNDLDGVLNEFDKVIGLDRLKVLHINDSKNTFKSHKDRHANIGEGSIGFDT
LNAIVHHPQLSHIPKILETPWVPLPEKEKVKVAPYKEEMAMFKAKSYNPNLMTDILS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcggatcacacgtttcaatgaagggaaaagagatgcttctaggtgctgctcaa
gaagcagcatcttacggaagtaatatctttatgatttacactggcgcgccccaaaacacg
cgtcgaaaagaagtctctgagtttagaattgaagaagcaaagacgtttatgaaagagaac
ggtattgaatttttcacagttcatgctccttacattgttaatcttgctaacacaactaag
gaaggttaccatgactttgcgatgcaatttttacgagaagaaattgaacgcgtagaagct
attggtgccactcaaattacgatgcatccaggtgcgcatgtgggcgcgggtgctgaagtt
gggattaagcaaattatcaacggtctaaatggcgttttaactgcagaacaatcaccacag
attgctttagagaccatggcaggtaaggggacagagattggtagaaactttgaagagtta
gccgctattattgatggcgttactttcaatgagaaattatcaattaccctagatacttgt
cacgtttatgatgcggggtatgatcttgtgaatgatttagatggagttttgaacgaattt
gataaagtgattggcttagatcggttaaaagtcttacatatcaatgattcaaaaaatact
tttaagagccataaagatagacatgctaatattggtgaaggatctattggctttgacaca
ttgaatgcaattgttcatcatccacaattaagtcatatacctaagattctagaaacacct
tgggtgccacttcctgagaaagaaaaggttaaagttgccccatataaagaagaaatggct
atgtttaaagcgaagtcttataatccgaatttaatgacagatattttaagttaa
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