Ruoffia tabacinasalis: VQP54_00505
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Entry
VQP54_00505 CDS
T10899
Name
(GenBank) ABC transporter transmembrane domain-containing protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VQP54_00505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtf02000
]
VQP54_00505
Transporters [BR:
rtf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VQP54_00505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_3
AAA_21
NB-ARC
nSTAND3
AAA_22
MMR_HSR1
AAA_23
KAP_NTPase
AAA_29
DUF87
Motif
Other DBs
NCBI-ProteinID:
WWL40446
LinkDB
All DBs
Position
92079..93833
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AA seq
584 aa
AA seq
DB search
MDMFGKLGWFFKQERKAYIFGISMLILLSVMTALVPMIIGIIIDNMTAGTITGSQLVMWS
VILVVIAIVQYAMRYVWRTKIFGTSAKLEKILRARLFTHFTQMDSIFFQKYRTGDLMART
TNDLNSIRMVAGGGILTLVDSLSQGLLTLFMMFFFVDWRLTLVSIIPIPLLTILIRFVGR
KLHYHSRKSQAAFSSMNDKVQESVTGMKVIKTFGEEELDIEDFKKMTTNVVDRNQKVYLF
DAAFRPASQLIMGAATILGVFFGGFLVSQGEITIGLLVAFISYVTRLQWPMIAIGRLFNI
LERGSASYDRILEILNEKSTIIEESDALSQSISGDIHIDIDEFAYPDDDDEASLRDIDIH
IKQGNTLGIVGRTGSGKTSLFKLLLRDYDQFKGDITFNGISIKDYQLDSLLANIGYVPQD
NFLFSTTVRDNIRFANMDTTNEEVEEIAKVTSVHEDILGFSEGYDTLVGERGVALSGGQK
QRISMARAMLINPELLILDDSLSAVDAKTEEAILNSIKETREDKSTIISAHRLSSVMHAD
EIVVLDEGQIVERGTHEELINNNGWYQEMYEHQQLELSSEMEEV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtttggaaaactgggttggttttttaaacaagaaagaaaagcgtatattttt
ggaatatcaatgttaattctattgagtgtgatgactgcgcttgtgccaatgattattggt
atcatcatagataatatgactgcgggtacaattacaggaagtcaattggttatgtggagt
gtcattctggttgttattgctatagttcaatatgcgatgcgttacgtatggcgtacgaag
atttttggaacatcagcaaaactggaaaagatacttagagcaagattgttcactcatttt
acacaaatggattcgatattctttcaaaaatatcgtaccggagatttaatggcgagaaca
acgaatgatttgaactcaattcgtatggtggctgggggaggtattttaaccttagttgac
tctttatctcaaggattacttacattgttcatgatgtttttctttgtagattggcgatta
actttagtgtcgattatacccattcctttgttaacgattttaattcgttttgtcggtcgt
aagcttcactatcactcacgaaaatctcaagcagctttttcttcgatgaacgataaagtt
caagagagtgttactggtatgaaagtaattaaaacgtttggtgaagaagagttagatatt
gaagactttaagaaaatgacgacaaacgtagttgatcggaatcaaaaagtttatttattt
gatgctgcgtttagacctgcaagtcaactaattatgggtgcagctacgattttaggtgta
ttctttggtggttttctcgtttcacaaggagaaattactattggtttattagttgctttc
atcagttatgtgactcgtttacagtggccgatgattgcgatcggacgtttgtttaatatt
ttagaacgtggttcagcaagttatgaccgtattttagaaattttaaatgaaaaaagtacg
attattgaagaatcggatgcattgagtcaatctatctcaggtgatattcatattgacata
gatgaatttgcttatccagatgatgatgacgaggcttccttacgtgatattgatattcat
attaaacaagggaatacacttggaatcgttggtcgtactggatctggtaagacgtcatta
tttaagttattgttacgtgattatgaccaatttaaaggagatattaccttcaatggaatt
tcgattaaagattatcaattagatagtttattagcgaatatcggttacgttcctcaagat
aatttcttattctcaacgactgttcgtgataatatccgttttgcgaatatggatactact
aatgaagaagttgaagaaattgctaaagtgacaagtgttcatgaggacatattaggcttt
agtgaaggctatgatacattagtaggtgaacgtggagtggctttatctggaggacaaaaa
caacgtatttctatggcgagagcgatgttaattaatccagagttattgatattggatgat
tcactttctgccgtagacgctaaaactgaagaagccattctaaattcaattaaagaaaca
cgtgaagacaaatcaacaataatttctgcccatcgtctaagtagtgtgatgcatgcggat
gagattgttgtgctggatgaaggtcaaattgttgagcgtggaacacacgaggaattaatt
aacaataatggttggtaccaagaaatgtatgaacaccaacaattagaattaagttctgaa
atggaagaggtgtaa
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