Ruoffia tabacinasalis: VQP54_01740
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Entry
VQP54_01740 CDS
T10899
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rtf Ruoffia tabacinasalis
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtf03016
]
VQP54_01740 (truB)
Enzymes [BR:
rtf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VQP54_01740 (truB)
Transfer RNA biogenesis [BR:
rtf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VQP54_01740 (truB)
Prokaryotic type
VQP54_01740 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WWL41403
LinkDB
All DBs
Position
complement(355651..356559)
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AA seq
302 aa
AA seq
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MNGILAVWKPKGMTSHDVVFKLRKMLRMKKIGHTGTLDPEVDGVLVVCLGKGTRLVELLM
DSPKVYFGEITLGTSTETEDAHGEVVDQKAVLQPVSNEKIDEAMSTFEGVIEQIPPMYSA
VKVNGRRLYEYAREGLEVERPIRNTVIHSFERDGEPVYNQESGTQSWKFKVDCGKGTYVR
TLAVDLGKKLGYPAHMSKLTRLQTSGFSDFESYTLEEIQTLIDNEEINDKVATIETALKH
ISKTDLDDELYDKVKNGQVLLKSDFEQDFQEPIAFYYNDKIIALYRQHPEKELYIKPYKM
FV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ataaatggtattttagcggtttggaaacctaaaggcatgacgagtcatgatgtggtattt
aaattgcgtaaaatgttaagaatgaaaaagattggacatactggaacacttgatccagaa
gtagatggtgttctagtagtttgtttaggaaaaggaactcgcttagttgagttgctgatg
gactcacctaaagtatattttggagagattacccttgggacgtcgacagaaactgaagat
gctcacggcgaagtcgttgaccaaaaagcagttcttcagcccgtttcaaatgaaaaaatc
gatgaagccatgtcaacatttgaaggtgttattgaacaaatcccaccgatgtattctgca
gtgaaagtgaatggtcgaagattatatgagtatgctcgagagggattagaggtagaacga
ccaatccgaaatactgtcattcattcgtttgaacgcgacggcgagcccgtgtataatcaa
gaaagtggtactcaatcttggaaattcaaagtagattgcggcaaaggaacttacgttaga
acattagctgtcgacttagggaagaagttagggtatcctgcgcatatgtcgaaattaaca
agattacaaacaagtgggttttcagattttgagagctatacacttgaagaaatacaaacg
ttaatagataatgaagaaatcaatgataaagtggctacaattgagactgcattgaagcat
atttccaaaactgatctagacgatgaattatatgacaaggtaaaaaatggacaagtactc
ttgaaaagcgattttgagcaggattttcaagagccaatcgctttctattataatgataaa
attatcgcgctttatcgtcagcatccagaaaaagaactatatataaaaccatacaaaatg
ttcgtttaa
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