Ruoffia tabacinasalis: VQP54_02235
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Entry
VQP54_02235 CDS
T10899
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18217
ATP-binding cassette, subfamily B, tetracycline resistant protein
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VQP54_02235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtf02000
]
VQP54_02235
01504 Antimicrobial resistance genes [BR:
rtf01504
]
VQP54_02235
Transporters [BR:
rtf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VQP54_02235
Antimicrobial resistance genes [BR:
rtf01504
]
Gene variants
Tetracycline resistance genes
Transporters
VQP54_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
MMR_HSR1
Zeta_toxin
AAA_22
AAA_7
AAA_29
DUF87
Dynamin_N
PilJ
Motif
Other DBs
NCBI-ProteinID:
WWL40760
LinkDB
All DBs
Position
complement(456696..458441)
Genome browser
AA seq
581 aa
AA seq
DB search
MKTFTRLLGYLRFEWKLLLSGFILLIFSTGLSIYTPIIASKMIDYVSQSIANVETVNLAF
ITEQFSFYLIITFISAILGYIGYLLLANGSNRLSKVIRDEAHEHMQKLPVSYFDDIPAGK
ISARIVNDTEVLRENFFANFTTQILINTMTILGVYIGMFAVSPTIASWLLLLIPIIVVWQ
MAFSKKIQPINTLWRESVSELNSKIAEIVQGVSIVQVFNQQEHMAEEFEQVNQTWLNTRK
ESLKYEAFFAWNLSGLFKSIVTLLVMLYIGTQFTNGILSISIGTLYIVINYVERLFDPIT
MIVRLITILQQALSAGMRVFELIDTPVEKDSNKQLIVTQGNVEFNDVTFAYKEGNNVLHQ
LNFHVNAGETIGLVGHTGSGKSSIINLLFRFYDPQEGQVIIDGQNIEDYNRESIREKMGI
VLQEPYLFSGTIATNISMNNPEITDEMVLDALIKVGAQPLIDKLEKGIHSEVVEKGQAFS
SGERQLISFARTLANNPKILILDEATSHIDTETEEIIQQAMKVVKEGRTTFIVAHRLSTI
KDADQIIVMDNGHIQERGTHRELLDLGGIYTQMYQMQGSMA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattcactagactcctcggttacttacgatttgaatggaaactcttgttatca
ggcttcattctgttgattttctctacgggcctttcaatctacacaccaattatcgcaagt
aaaatgattgattacgtgtcccaatctattgcgaacgtagagacagttaatctagccttt
attacggaacaatttagcttttatcttattattacatttatttcagcgatacttggttac
ataggatatttgctcttagcgaatggatcaaatcggctaagtaaagtcattcgggatgag
gcgcatgaacatatgcaaaagttaccggtaagttattttgatgatattccagcgggtaag
atatcggctagaatcgtgaatgatactgaggttttaagggagaactttttcgcaaatttc
acaacacaaatactcattaatacaatgaccattctaggtgtatatattggtatgtttgct
gttagtccaacaattgcgagttggttattactgctcataccaattatcgtcgtttggcaa
atggctttctctaaaaaaattcaaccaatcaatactttatggagagaatctgttagtgaa
ttgaatagtaaaattgccgaaattgttcaaggtgtgtcgattgttcaagtattcaatcaa
caagagcacatggctgaagaatttgagcaagttaatcaaacctggcttaatactagaaaa
gaatccctaaagtacgaagcgttctttgcttggaacttgtccgggctctttaagagtatt
gtgaccttacttgtgatgttgtatataggaacgcagttcacaaatggcatattatcaata
tcgattggaaccttatatattgttatcaattatgttgaacgattatttgatcctattact
atgattgttcgtttgattacaatattgcaacaagctttatccgcaggaatgcgagtgttc
gagttaatagatactccggtagagaaagattccaacaaacaattaatagttactcaagga
aatgttgagtttaatgatgtgacctttgcatataaagaaggcaataatgtattgcatcaa
ttaaatttccatgttaatgcaggtgagaccatcggtttagttggacacacagggtccggt
aaaagttcgattattaacttactatttcgcttttacgatccacaagaaggccaagtaatc
atagatggtcaaaatattgaagattataatcgagaaagcattcgagaaaaaatggggatt
gtcttgcaagaaccgtatttattttctggtacgattgcgacaaatatcagtatgaataat
ccagagataaccgatgaaatggtgcttgatgcactaatcaaagttggagcacaaccatta
attgataaattagaaaaaggaattcattcggaagttgtggaaaaaggacaagctttttct
tcaggggagagacaattgatatcctttgctcgtaccttagccaataatccaaaaatattg
atacttgacgaagcaacttcacatattgacactgagactgaggaaattattcaacaagcg
atgaaagttgtaaaagaaggacgtacgacctttattgtagcgcaccgactttcaaccatt
aaagatgcagatcaaatcatcgtcatggacaacggacatatccaagagaggggcactcac
agagagttacttgatctgggaggcatatatacgcaaatgtatcaaatgcaaggaagtatg
gcataa
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