Ruoffia tabacinasalis: VQP54_02255
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Entry
VQP54_02255 CDS
T10899
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf00300
Lysine biosynthesis
rtf00470
D-Amino acid metabolism
rtf01100
Metabolic pathways
rtf01110
Biosynthesis of secondary metabolites
rtf01120
Microbial metabolism in diverse environments
rtf01230
Biosynthesis of amino acids
Module
rtf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VQP54_02255 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VQP54_02255 (lysA)
Enzymes [BR:
rtf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VQP54_02255 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WWL40764
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All DBs
Position
complement(462348..463643)
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AA seq
431 aa
AA seq
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MQLETYQTKVNNELVHSQHKYSDLAQQYGTPLYIFDEESFRERVYNFKNALENPYFETEL
LFASKSVLTLAIAKLISEYGIGQDVVSAGEIFTGKKGGVQPSKMYFHGNNKLDEELAFAV
DQEVGTIVIDNRMEADRLNNILEQKGKKQRALLRLNPGVEAHTHEYIKTANLDSKFGESV
FDEKIEDIIESIHSYDNIELAGLHCHIGSQIFDSESFIKAADEMLLFAHRIQTNLNIPIR
EINFGGGFGVYYTEEDKPFDIAEFLPNFIEHVHEKSTEYGIQLEKVTIEPGRSLVNNSGS
TLYTIGDIKKTVGGKKYAFIDGGMTDNIRPALYQAEYEAVLPNKINEPLKETYTIAGKAC
ESGDVVINNIDLPQVETGDLLLVNGTGSYNYSMASNYNHIPIPAMVHIDGEKSYLTVKRQ
SFEDIIANNIL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagaaacgtatcaaacgaaggtgaataacgagctggttcattcacaacataaa
tattcagatttagctcagcaatatggaacgccgctttatatattcgatgaagagagtttt
agagaacgcgtttataatttcaaaaatgctttagagaatccttactttgagacagagtta
ttatttgcatccaagtctgttttgacacttgcgattgcaaaattgatttcagagtatgga
ataggacaagatgttgttagtgctggggagatttttactgggaagaaaggtggcgttcag
ccatcgaagatgtactttcacggaaataacaaattagatgaggaattagcttttgcggtc
gatcaagaagtgggaacaattgtcattgataaccggatggaagctgatagactcaataat
attttagagcaaaaagggaaaaagcaacgcgcactattacgcttaaatcctggagttgag
gcgcatactcatgaatacattaaaacagctaacttagattcaaaatttggagagagtgtc
ttcgatgagaagattgaagacattatagaaagcatccatagctatgataatattgaatta
gcaggtttacattgtcacattggtagtcaaatatttgattcagaatcatttattaaagcg
gcggatgaaatgttactctttgctcatcgcattcaaacgaacttaaatattccgattcgt
gaaattaatttcggtggcggttttggtgtttactatactgaagaggacaaaccttttgat
attgccgaatttctgccaaattttatcgagcatgttcatgaaaagtctactgaatatggg
atacaattagagaaggttacaattgaacctggtagatcattagttaacaattctggtagt
actttatacacgattggtgatattaagaagacagtaggtggtaagaaatatgcctttatt
gatggcgggatgacagataatatccgtccagctttatatcaggctgaatatgaagcagtc
ctaccaaataaaattaatgaaccgctcaaagaaacgtacaccatagctggtaaagcgtgt
gagagtggggatgttgtgattaataatattgatcttcctcaagttgaaacaggcgattta
ttattagtaaatggtacgggttcatataattattctatggccagcaattataatcatatc
ccaattccagccatggtgcatattgatggagaaaaaagttacttaacagtcaaacgtcag
tcttttgaagatatcatagcaaataatattttatag
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