Ruoffia tabacinasalis: VQP54_02275
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Entry
VQP54_02275 CDS
T10899
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VQP54_02275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rtf02022
]
VQP54_02275
Two-component system [BR:
rtf02022
]
NarL family
LiaS-LiaR (cell wall stress response)
VQP54_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_24
HTH_40
DUF6115
HTH_7
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
WWL40768
LinkDB
All DBs
Position
complement(467910..468539)
Genome browser
AA seq
209 aa
AA seq
DB search
MIKVLLVDDHEMVRLGVSSYLDVQPDIEVIGEAGNGLMGYHKALEDKPDIILMDLVMEVM
DGVEATQKIMEEWPEAKIIIVTSFIDDEKVYPAIEAGAKSYLLKTSSASEIADAIRATYE
GDTVMGPEVTSKLLEYEDKSRQKQAHDDLTNRELEVLLLVSKGYTNQEIADELFITLKTV
KTHVSNILSKLEVNDRTQATIYAYQHELV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtattactagtcgatgatcatgaaatggtacgtttaggggtgtcatcctac
ttggatgtccaacccgacatcgaagtgatcggtgaggctggaaatggtcttatgggttat
cacaaagcattagaagataaaccagacatcatcttgatggatttggtgatggaagtcatg
gatggagtagaagcgactcaaaaaattatggaagagtggccagaagccaaaattattatt
gtgacatctttcatcgatgacgaaaaagtctatcctgcgattgaagccggcgctaagagt
tatttattaaaaacatcttctgccagtgaaattgcggatgctatccgtgcgacttacgaa
ggcgacacggtgatgggacctgaagtaacaagtaagttgttagaatatgaagataaatcc
agacaaaaacaagcacacgatgatttaaccaatcgtgaattagaagtattattattagtt
tcaaaagggtataccaatcaagagattgcagatgagctattcatcacgctaaaaacagta
aaaacacatgtttcgaatatcttatctaaacttgaagtaaatgaccgcacacaagcaact
atctatgcttatcagcatgagctcgtataa
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