Ruoffia tabacinasalis: VQP54_02565
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Entry
VQP54_02565 CDS
T10899
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VQP54_02565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtf02000
]
VQP54_02565
Transporters [BR:
rtf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VQP54_02565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_21
AAA_29
AAA_24
TsaE
AAA
AAA_7
AAA_30
SMC_N
ATP_bind_1
RsgA_GTPase
EMC3_TMCO1
DUF87
MMR_HSR1
AAA_16
AAA_5
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WWL40815
LinkDB
All DBs
Position
complement(522560..524440)
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AA seq
626 aa
AA seq
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MADKDTQQEEKVQNQPKVAGPRGQGAVEKPKNFKDSLLRIFKEVLNFKWAILLVFFTTIL
SVLFNIIGPRELGKATSTLFEGVLAEVQGTGSIEFNVIGRILLTVLALYVVSSIFNWVQG
FVMTGVTENVTYGLRKKMLDKIDNMPMKYFESHSHGEVLSRISNDIDTLGASLSQSFAQL
LNSIMTMLGIAIIMFTINWILALVVLIVVPISLITIRILINVSQKYFRQQQVSLGVINGQ
IEENFSGQNIVRAFNQEDNAIDVFYKDNAKLEESAWKSQFYSGVMFPFMRFLQNFGYAAV
VMVGAYLVIVGMIRVGDIQAFTQYVNRFTQPITQLAQIVTLLQTMVAAAERVFEFLDEEE
QDQTTGNALDIENVHGDVSFNHVQFGYNPDQVIITDFNADIKAGQKVALVGPTGAGKSTM
VKLLMRFYDVDKGSINLDGVDVKTYSRANYQRSISMVLQDTWLFNGTIMENIRYGRLDAT
DEEVIEAAKAVHVHNFVKNLPGGYNFEINEEASNISQGQKQLVTIARALLSDRPVLILDE
ATSSVDTRTEILIQQAMDRIVEGRTSFVIAHRLSTIKNSDLILYMENGDIVEQGNHDELI
ARGDKYANLYNSQFASGGSPFEEFDD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagatactcaacaagaagaaaaagtacaaaatcaaccaaaagttgctgga
ccccgtggtcaaggcgccgtagaaaaaccaaaaaactttaaagatagcttacttcgaatc
tttaaagaagtattgaattttaaatgggcaatattacttgtcttttttacgactattctc
tctgtattatttaatattattggtcctcgtgaattaggtaaagccacttcaacattattt
gaaggtgtattagctgaagtgcaaggaacaggttcgattgaatttaatgttatcggtaga
atcttattaacagtattagccttatacgtagtgagttcaattttcaactgggttcaaggt
tttgtaatgacaggtgttacggagaatgtcacttacggtttacgtaaaaagatgttagat
aagattgataatatgccaatgaaatactttgaatctcactcacatggtgaggtcttatca
agaattagtaacgatatcgatacacttggagcttcattatcacagagttttgctcaatta
ttaaactctatcatgacaatgcttggtattgcgattattatgtttacaattaattggata
ctcgctttagttgtattaattgtcgtaccaattagtttaattacaattcgtatactaatt
aatgtatctcaaaaatacttccgtcaacaacaagtatcccttggtgtaattaacggacaa
attgaagaaaacttctcaggacaaaatatagttagagcatttaaccaagaagataatgct
attgacgtcttttataaagataatgctaaactagaagaatctgcgtggaaatcacagttc
tactcaggtgtcatgttcccattcatgcgtttcttacaaaactttggctatgctgctgtt
gtaatggttggggcataccttgtaattgttggtatgattcgtgtcggggatattcaagcc
tttactcaatacgttaaccgatttacacaacctatcactcagttagctcaaattgtaact
ttattacaaacaatggttgcagcggcagagcgtgtgtttgaattcttagatgaagaagaa
caagatcaaacaacaggtaatgctttagatattgaaaatgtacacggtgatgtatcattt
aaccatgttcaatttggatataatcctgatcaagtcatcattacagactttaatgccgat
ataaaagccggacaaaaggttgccttagttggtccgacaggtgcaggtaaatcgactatg
gttaagctgttaatgcgtttctatgatgttgataaaggttcgattaacttagatggtgtg
gacgttaaaacgtatagtcgtgctaattaccaacgttcaatttcgatggtattgcaagat
acttggttatttaacggaacaattatggaaaacattcgttacggacgtttagacgcaacg
gatgaagaagtgattgaagcagccaaagctgttcatgtccataatttcgttaagaacttg
cctggtggctataactttgaaattaacgaagaagcttcaaacatctcacaaggtcaaaaa
caacttgtgacgattgcgagagccttgttatcagaccgtccagttcttattcttgatgag
gcgacaagttcagtcgatactcgtactgaaattctcatccaacaagcgatggaccgtatt
gtagaaggtcgtacaagtttcgttattgctcaccgtctttcaacaattaaaaactctgat
ttaattctatacatggaaaacggagacattgttgaacaagggaaccatgacgaattaatt
gctagaggtgacaaatatgcaaatctttacaatagtcaattcgcttcaggtggttcaccg
tttgaggaatttgatgattaa
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