KEGG   Ruoffia tabacinasalis: VQP54_02955
Entry
VQP54_02955       CDS       T10899                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rtf  Ruoffia tabacinasalis
Pathway
rtf00260  Glycine, serine and threonine metabolism
rtf00460  Cyanoamino acid metabolism
rtf00630  Glyoxylate and dicarboxylate metabolism
rtf00670  One carbon pool by folate
rtf00680  Methane metabolism
rtf01100  Metabolic pathways
rtf01110  Biosynthesis of secondary metabolites
rtf01120  Microbial metabolism in diverse environments
rtf01200  Carbon metabolism
rtf01230  Biosynthesis of amino acids
rtf01240  Biosynthesis of cofactors
rtf04981  Folate transport and metabolism
Module
rtf_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:rtf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    VQP54_02955 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    VQP54_02955 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VQP54_02955 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    VQP54_02955 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    VQP54_02955 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    VQP54_02955 (glyA)
Enzymes [BR:rtf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     VQP54_02955 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP Beta_elim_lyase Aminotran_5 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: WWL40887
LinkDB
Position
complement(607861..609084)
AA seq 407 aa
MTFTDDTFVFEQIKNEQLRQQNGIELIASENFVSPSVLKAQGSILTNKYAEGYPGRRYYG
GCEFVDKIEQIAIDRAKELFNAEYANVQPHSGSSANLAVYRAFLEPGDKVLGMDLSQGGH
LTHGSPVNFSGQSYEMYSYGVDPTTERIDYDKLEEIATEVQPKMLIAGASAYSREIDFER
IGDIAKKVGAIYFVDMAHIAGLVAVGEHPDPIPYADVVTTTTHKTLRGPRGGMILAKEEH
AKKLNKAIFPGIQGGPLEHVIAAKAVALHEALQPAFKDYIKQVKLNAKAMSRIFDLSPLR
IISGGTDNHLFLIDVTPLGITGKWAQERLDAVGITVNKNSIPFDKESFVQTSGIRIGTAA
ITTRGLKESDVELVADFILDALSAEEDEMSEIKDKVYELMKDRPLFK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgacatttactgatgatacatttgtatttgaacagattaagaacgagcaactacgtcaa
caaaatgggattgaattaattgcgtctgagaatttcgtttcaccaagtgttttaaaggct
caaggaagcattttgactaacaaatatgctgaagggtatcctggtaggcgatattatggc
ggttgcgaatttgttgataaaattgaacaaattgcgattgatcgagcaaaagaattattt
aatgctgagtatgcaaacgtgcaaccacattctggttctagtgcaaacttagctgtttat
cgtgcctttttagaaccaggcgacaaagttttgggtatggacttatctcaaggtggtcat
ctaactcatggttcgccagtcaactttagtggacaatcttatgagatgtatagttatggt
gttgatccgacgacagaacgcattgattacgataaacttgaagaaattgctacagaagtc
caacccaaaatgttgattgctggtgcaagtgcttattcgcgtgaaatcgactttgaacgc
atcggtgacatcgctaaaaaagtgggagcgatctattttgtagatatggctcacattgct
ggtttagtagcggttggagagcatccagatcctattccttatgcggatgttgtaacgaca
acaacacataagacacttcgaggacctcgtggtgggatgattcttgcgaaagaagagcat
gcgaagaaattaaacaaagcgatatttccaggtattcaaggcgggccattggagcatgtc
attgctgccaaagctgttgcgcttcatgaagcattgcaaccagcctttaaagattatatt
aagcaagtaaaactcaatgcaaaagcaatgtcacgaatatttgatctaagtccactaaga
attatttcaggcggcacagacaatcacttattcttaattgacgtgactccacttggtatc
acaggtaaatgggcacaagagcgtttagatgcagtaggtatcactgtaaataaaaactca
atcccatttgataaagaatcatttgttcaaacaagtggtattcgaattggaacagccgca
attactacacgtggattgaaagaatcagatgtagaattagtagcggattttatccttgat
gctttatcagcagaagaggacgaaatgtcagaaattaaagacaaggtctatgaactaatg
aaagaccgaccattatttaaataa

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