Ruoffia tabacinasalis: VQP54_02955
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Entry
VQP54_02955 CDS
T10899
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf00260
Glycine, serine and threonine metabolism
rtf00460
Cyanoamino acid metabolism
rtf00630
Glyoxylate and dicarboxylate metabolism
rtf00670
One carbon pool by folate
rtf00680
Methane metabolism
rtf01100
Metabolic pathways
rtf01110
Biosynthesis of secondary metabolites
rtf01120
Microbial metabolism in diverse environments
rtf01200
Carbon metabolism
rtf01230
Biosynthesis of amino acids
rtf01240
Biosynthesis of cofactors
rtf04981
Folate transport and metabolism
Module
rtf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VQP54_02955 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VQP54_02955 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VQP54_02955 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VQP54_02955 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VQP54_02955 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VQP54_02955 (glyA)
Enzymes [BR:
rtf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VQP54_02955 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WWL40887
LinkDB
All DBs
Position
complement(607861..609084)
Genome browser
AA seq
407 aa
AA seq
DB search
MTFTDDTFVFEQIKNEQLRQQNGIELIASENFVSPSVLKAQGSILTNKYAEGYPGRRYYG
GCEFVDKIEQIAIDRAKELFNAEYANVQPHSGSSANLAVYRAFLEPGDKVLGMDLSQGGH
LTHGSPVNFSGQSYEMYSYGVDPTTERIDYDKLEEIATEVQPKMLIAGASAYSREIDFER
IGDIAKKVGAIYFVDMAHIAGLVAVGEHPDPIPYADVVTTTTHKTLRGPRGGMILAKEEH
AKKLNKAIFPGIQGGPLEHVIAAKAVALHEALQPAFKDYIKQVKLNAKAMSRIFDLSPLR
IISGGTDNHLFLIDVTPLGITGKWAQERLDAVGITVNKNSIPFDKESFVQTSGIRIGTAA
ITTRGLKESDVELVADFILDALSAEEDEMSEIKDKVYELMKDRPLFK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacatttactgatgatacatttgtatttgaacagattaagaacgagcaactacgtcaa
caaaatgggattgaattaattgcgtctgagaatttcgtttcaccaagtgttttaaaggct
caaggaagcattttgactaacaaatatgctgaagggtatcctggtaggcgatattatggc
ggttgcgaatttgttgataaaattgaacaaattgcgattgatcgagcaaaagaattattt
aatgctgagtatgcaaacgtgcaaccacattctggttctagtgcaaacttagctgtttat
cgtgcctttttagaaccaggcgacaaagttttgggtatggacttatctcaaggtggtcat
ctaactcatggttcgccagtcaactttagtggacaatcttatgagatgtatagttatggt
gttgatccgacgacagaacgcattgattacgataaacttgaagaaattgctacagaagtc
caacccaaaatgttgattgctggtgcaagtgcttattcgcgtgaaatcgactttgaacgc
atcggtgacatcgctaaaaaagtgggagcgatctattttgtagatatggctcacattgct
ggtttagtagcggttggagagcatccagatcctattccttatgcggatgttgtaacgaca
acaacacataagacacttcgaggacctcgtggtgggatgattcttgcgaaagaagagcat
gcgaagaaattaaacaaagcgatatttccaggtattcaaggcgggccattggagcatgtc
attgctgccaaagctgttgcgcttcatgaagcattgcaaccagcctttaaagattatatt
aagcaagtaaaactcaatgcaaaagcaatgtcacgaatatttgatctaagtccactaaga
attatttcaggcggcacagacaatcacttattcttaattgacgtgactccacttggtatc
acaggtaaatgggcacaagagcgtttagatgcagtaggtatcactgtaaataaaaactca
atcccatttgataaagaatcatttgttcaaacaagtggtattcgaattggaacagccgca
attactacacgtggattgaaagaatcagatgtagaattagtagcggattttatccttgat
gctttatcagcagaagaggacgaaatgtcagaaattaaagacaaggtctatgaactaatg
aaagaccgaccattatttaaataa
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