Ruoffia tabacinasalis: VQP54_04450
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Entry
VQP54_04450 CDS
T10899
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf02010
ABC transporters
rtf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VQP54_04450
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VQP54_04450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtf02000
]
VQP54_04450
Transporters [BR:
rtf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VQP54_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF4381
Motif
Other DBs
NCBI-ProteinID:
WWL41160
LinkDB
All DBs
Position
complement(931146..932117)
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AA seq
323 aa
AA seq
DB search
MQRIHLRSISWLALALFGFAAIYFLTSTGVINPFYRITLMTIMLNVIYAAGLNLILGVAG
QFSLGHAGFIAIGAYSAAIFTKEMDNSTLGLFVGIAVGMVIAMIVALLVGVPTLRLKGDY
LAIATLGVSEIIRVLINNLRDITNGPAGISGIPLVTTWELVYIFLIIIVTIIVCYTYSSS
GRATLAINQNEIAAEAMGVSVTKYKVMAFVIGAMTAAVGGSLQATFIGIVTPSDYTFNRS
IDVLIIVVFGGIGSYTGSFIAAILLGLLNLFLQDYGQLRMVIYAVALVLIMIFRPGGLLG
TWEFKFGSIVDRLFGSKDKEAVS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaatacatttacgaagtatatcatggttagcgctagcgctctttggttttgcg
gcaatctactttctaacttcaacaggcgttattaatccattctaccgaattacattgatg
acaattatgttgaacgttatttatgcagcaggtttaaaccttatcttaggagtcgccggt
caattttcattaggacatgccggttttattgctattggagcttattcagctgccatcttt
acaaaagaaatggacaatagtacattaggtttatttgttgggattgcagtcggaatggtc
attgcaatgatcgtggcattattagttggtgtccctactttaagactgaagggtgattac
ttagctatcgcaacacttggtgttagtgagattatccgtgttctaattaataatttacgt
gatattacaaatggtccagcaggtatcagtggtattccattagtaacaacttgggagtta
gtttatatcttcttaattatcattgtaacgattattgtatgttatacatatagtagtagt
ggacgtgccactttagcaatcaatcaaaacgaaattgctgctgaggccatgggagtgagt
gttactaaatataaagttatggcttttgttattggagcaatgacggcagctgttggtggg
tcacttcaagcgacattcattggtatcgtaacgccaagtgattatacatttaaccgttca
attgatgtattaatcattgtcgtatttggtggtattggtagttacactggttctttcatt
gctgcgatattattaggattacttaacttattccttcaagactatggtcaattgcgtatg
gttatttatgccgttgccttagtgctaattatgattttccgcccaggagggttattagga
acttgggaattcaaatttggtagtatcgtggacagattatttggaagtaaagataaggag
gcagtttcatga
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