Ruoffia tabacinasalis: VQP54_05550
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Entry
VQP54_05550 CDS
T10899
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf03030
DNA replication
rtf03430
Mismatch repair
rtf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VQP54_05550
03430 Mismatch repair
VQP54_05550
03440 Homologous recombination
VQP54_05550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtf03032
]
VQP54_05550
03400 DNA repair and recombination proteins [BR:
rtf03400
]
VQP54_05550
Enzymes [BR:
rtf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VQP54_05550
DNA replication proteins [BR:
rtf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VQP54_05550
DNA repair and recombination proteins [BR:
rtf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VQP54_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WWL41361
LinkDB
All DBs
Position
complement(1147285..1147836)
Genome browser
AA seq
183 aa
AA seq
DB search
MEYVAFDFETANGQRWSACSLGAVKVVDGIMVKHFYELIDPLTSFAPNNIRIHGITPEQV
QGKPAYDEVIGRFQEFVGEAPVVSHTQFDRGVIRAANEKFRLPELGMNYFDSCQLARNLW
RGKLSSFSLKSLCQQIKFEFNHHNALEDARAAAYVIHALTMYSKTQTVEDLLKVGNVKQF
YTL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgttgcatttgactttgaaacagccaacggtcagcgctggtcagcttgttca
cttggggcagtaaaagttgtcgacggaattatggttaaacatttttatgaattaattgat
ccactgacttcttttgcaccgaacaatattcgtattcacggaataacacccgaacaagtt
caaggaaaaccagcatatgatgaagtgattgggcgattccaagaatttgtaggagaagcg
ccagttgtgagtcacactcaattcgaccgaggtgtgattcgtgcagctaatgaaaaattt
agactcccagagttaggtatgaattattttgactcttgtcagctggcccgtaatttatgg
cgcggaaagctctcaagttttagtttaaaatcattatgccagcaaataaaatttgaattt
aatcatcataatgctctagaagatgcgcgagccgctgcttatgtcatccacgctttaacg
atgtactcgaagacgcagactgttgaggatttgttgaaagtaggaaatgtgaagcagttt
tatacattgtag
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