Ruoffia tabacinasalis: VQP54_05690
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Entry
VQP54_05690 CDS
T10899
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf01501
beta-Lactam resistance
rtf02010
ABC transporters
rtf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VQP54_05690
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VQP54_05690
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VQP54_05690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtf02000
]
VQP54_05690
Transporters [BR:
rtf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VQP54_05690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WWL41386
LinkDB
All DBs
Position
1174737..1176386
Genome browser
AA seq
549 aa
AA seq
DB search
MNIKRKISSLILSLLTINTLAAPSTIQAQEDVVIDPNIEQTISLSTGGEISSLDSAKYSG
DVPSSDTITQLFEGLYRIGEGNDVEFGQAESVDISEDGLTYTFTLKDDIYWSNGDPVTAN
DFEFSFKRLVDPNAGTQSSQASEVLKNAVQIKNGELSPDELGVTALDEKTLEIILEYPAD
YFPKLLSATRFLPVNQKYYEEVQDQYGTSSDFLVVNGPFNIEGWNGVNLEWTFVKNDNYW
DAENVYLDEAHISVIKEIGTGVDLFEAGELDYVTLSSEYVQQYAGSDILHTLPKATIGYL
GFNTTRENTGNIALRRAISQAFDKELYAQSVIQDGATPLNGQVPRDFAFNEAGEDYRDVA
GDMLVFNLEEAQADWNTAKEELGFDIIELELLVSDVELSRRTSEYLQAQLEQNLPGLSIT
IRSVPLKNRLDIQSDLDFDIYYGTWTPGFQDASVFVEQYTTSGGINFGDYYNEAYEELVR
SAKYDFANDLDGRWETLIEAETLSIKEEAAAAPIYQGANAFLLAPEVKGLKVLPFGRSYD
LRQVYISAQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaaaagaaaaattagctcactgatcttatcattattaacaattaatacactt
gctgcaccaagtacgattcaagctcaagaagacgtcgttattgatcctaatatagaacaa
acaattagtctttcgactggaggagaaatttcttcacttgatagcgccaagtattcaggt
gacgttccctcttctgatacaattacacaattatttgaaggcttgtaccgtattggtgaa
ggcaacgacgttgaattcggacaagcagaaagtgttgatatcagtgaagacggattgacc
tatacgtttacattaaaggacgatatctactggagtaatggtgaccctgttactgccaat
gactttgagttttctttcaaacgcttagttgatcccaatgctggaactcaatcttcgcaa
gcgagtgaggtcttaaagaatgctgttcaaattaaaaacggtgaattaagtccagatgaa
ttgggtgtcacggcattggatgaaaagactcttgagattattcttgagtatccggccgat
tactttccaaagctactttcagcgactcgcttcttacctgtaaatcagaaatactatgaa
gaagttcaagatcagtatggaacgtcatcagactttttagttgtgaatggaccttttaat
attgaaggttggaacggcgtgaatttggaatggaccttcgtaaaaaatgataattattgg
gacgctgaaaatgtttaccttgatgaagctcacatatctgtcattaaagaaatcggaact
ggggttgatttattcgaagccggtgaacttgattatgtcactttatcaagtgaatatgtt
caacaatacgcaggaagtgatattcttcatacccttccaaaagcaacgattggttactta
ggcttcaacacaacacgtgaaaatacgggcaatatcgctttaagacgtgcgatttctcaa
gccttcgataaagaactttatgctcaatctgtcatccaagatggggcgactcccttaaat
ggacaagtcccacgtgactttgcctttaatgaagccggtgaagattaccgtgatgttgct
ggagatatgttagtttttaatcttgaagaggctcaagcggactggaatactgccaaagaa
gagctaggttttgatataatagaattagaactacttgtttctgacgttgaactttcaaga
aggacctcagaataccttcaagctcaattagaacagaatctacctggtttaagtattaca
atccgtagtgttccattgaaaaaccgtttagatattcaaagtgatttagattttgatatt
tattatggaacttggacacctggcttccaagatgcttccgtgtttgttgaacagtataca
acgagtggtggtattaactttggcgattactataatgaagcgtatgaagaactcgttcgt
tcagctaaatatgacttcgcaaatgacttagatggccgttgggaaactctaattgaagct
gaaacactaagtattaaagaagaagccgctgcagctccgatttatcaaggtgccaatgct
ttcttacttgctccagaagtgaaaggcttgaaagtgttaccttttggtcgaagttatgat
ttacgccaagtatatatctctgctcagtag
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