Ruoffia tabacinasalis: VQP54_05700
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Entry
VQP54_05700 CDS
T10899
Symbol
opp3C
Name
(GenBank) oligopeptide ABC transporter permease
KO
K15582
oligopeptide transport system permease protein
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf01501
beta-Lactam resistance
rtf02010
ABC transporters
rtf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VQP54_05700 (opp3C)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VQP54_05700 (opp3C)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VQP54_05700 (opp3C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtf02000
]
VQP54_05700 (opp3C)
Transporters [BR:
rtf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VQP54_05700 (opp3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
LTN1_E3_ligase_5th
Motif
Other DBs
NCBI-ProteinID:
WWL41388
LinkDB
All DBs
Position
1177444..1178517
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AA seq
357 aa
AA seq
DB search
MSHTEIPNTNYNQKIVEHTKDIDDSLFTTKVQLESDRNEEIVAPTLNFLQDSWRRLKKNK
GAMISFFVISLIIIIAVFAPFFAPHDPNAQNPAWSNLPPKIPGLEGFSWFNGTSVNRGGA
LIDSYDQSGVPEGVYYYLGTDSLGRDLLSRIIFGTRISLIVAFAAALINLIFGIAYGMIS
GWMGGRVDNLMQRVLEILSGVPNLVIVVLMLLVMNPGLVSIIITIALTSWITMSRVVRAQ
TIRLKQQEYVLAAQVLGQPTIKIMFKHILPNMMGLIIVQVMFALPSAIFFEAFLSFIGIG
IPAPNASLGTLINDGYKTFRFLPHLMWYPAAVISIIMLSFNLLADGLRDAFDPKMKE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatacagagattcctaatacaaactataatcaaaaaattgtagaacacacaaaa
gatatagacgactcactatttacaacaaaagttcaattagaatctgatcgaaatgaggaa
attgtcgctcctacactaaacttcctccaagattcttggcgtcgtctcaaaaagaataaa
ggcgcgatgatatcattctttgttatttctttgattatcattatcgctgtgtttgcaccc
ttctttgcgccacatgatccaaatgcgcaaaaccctgcatggtcaaatctaccaccaaaa
attcctggtttagaagggtttagttggttcaatggaacgtctgtaaaccgtgggggtgca
ttaattgatagttatgaccaatctggtgtacctgaaggagtttattattatcttggaact
gatagtttaggtcgagacctattgtctcgcatcatcttcgggacgcggatttccttaatc
gttgccttcgcagcagcgctaataaacttaatattcggaattgcatacggtatgatttct
ggatggatgggcggacgcgtggataacctcatgcaacgagtgcttgaaattctatccggt
gttcctaacttagttattgtcgtactcatgcttttagttatgaatcccggtttggtttcg
attattattaccattgctttaaccagttggattacgatgtctcgggttgtgcgagctcaa
acaattcgactcaagcaacaggaatatgtcttagctgcacaagtgttaggtcaacccact
attaaaattatgttcaaacatatcttaccaaatatgatgggcttgattatcgtacaagtc
atgtttgccttaccgtcagcaatattctttgaagcctttttaagcttcattggtatcgga
attccagcgcctaacgcatcccttggaactcttattaatgacggttacaaaacattccga
ttcttacctcatctcatgtggtatccagcagcagtgatttcgattattatgctttcattt
aaccttttagctgatggtttaagagatgcattcgatccgaaaatgaaagaatag
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