Ruoffia tabacinasalis: VQP54_05980
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Entry
VQP54_05980 CDS
T10899
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
rtf Ruoffia tabacinasalis
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtf03009
]
VQP54_05980 (rsmI)
Enzymes [BR:
rtf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
VQP54_05980 (rsmI)
Ribosome biogenesis [BR:
rtf03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VQP54_05980 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
PucR
GH123_cat
DUF4251
Motif
Other DBs
NCBI-ProteinID:
WWL41434
LinkDB
All DBs
Position
complement(1231256..1232131)
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AA seq
291 aa
AA seq
DB search
MSVQQHSFQQQEAGILYLVPTPIGNLEDMTFRAVNILKEADIVLAEDTRNTIKLLNHFDI
QANLRSFHEHSRSHEVTAWVNELHEGKTIALVSDAGMPLINDPGQPLVQACLEEDLPVVA
LPGANAALTALVASGLPSEQFTYYGFFPRGKADQKAALEIVGQRDETAIFYESPYRIKQA
VSQIVTHLGEDTQVVIARELTKRYEEYIRASAAEVSEHLKDRELKGECVLLIEGGSVKLA
TDEAVSSLPYKEHVELMMATKGIQAKDAIKEVAKIREVKKQIVYNDYHNLT
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atcagtgtgcaacaacatagtttccaacaacaagaagcaggaatattatatttagtgcca
acaccgattggtaatttggaagatatgacgtttagagccgtcaatatcttaaaagaggct
gatattgtcctagctgaagatacacgaaatacgattaagttattgaatcattttgatatt
caagcgaatttacgtagttttcatgaacattcacgcagtcatgaagtcacagcttgggtt
aatgaattacatgaaggtaagaccattgccttagtcagtgatgccggaatgcctttaatt
aatgatcctgggcaacctctagttcaagcttgtttggaagaggatttgccagttgtggct
ttaccaggagcgaatgcggctttaactgccctagttgcttcaggtttaccaagtgaacag
tttacttattacggctttttcccacgaggtaaagcagatcaaaaagcggctttagaaatt
gtcgggcaaagagatgagacggcgattttttatgaatcaccctaccggattaaacaagct
gtatcgcaaattgtgacgcatttaggtgaagacacgcaggttgtcatcgcgcgtgaacta
acaaaacgttatgaagaatacattcgcgcgagtgcagcggaagtgagtgaacatcttaaa
gaccgtgaacttaaaggggaatgcgtacttttaatcgaaggaggatctgtcaaattggcg
acagacgaagcggtatcgagtttaccttacaaagaacatgtggaattaatgatggccaca
aaagggattcaagcgaaagatgcgattaaagaagtagccaaaattcgtgaagttaaaaag
caaattgtttataatgattatcataacttaacttaa
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