Ruoffia tabacinasalis: VQP54_07000
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Entry
VQP54_07000 CDS
T10899
Name
(GenBank) GHKL domain-containing protein
KO
K07706
two-component system, LytTR family, sensor histidine kinase AgrC [EC:
2.7.13.3
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf02020
Two-component system
rtf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VQP54_07000
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VQP54_07000
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtf01001
]
VQP54_07000
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rtf02022
]
VQP54_07000
Enzymes [BR:
rtf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
VQP54_07000
Protein kinases [BR:
rtf01001
]
Histidine kinases
LytTR family [OT]
VQP54_07000
Two-component system [BR:
rtf02022
]
LytTR family
AgrC-AgrA (exoprotein synthesis)
VQP54_07000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_5
HATPase_c
SPOB_a
U79_P34
Motif
Other DBs
NCBI-ProteinID:
WWL39511
LinkDB
All DBs
Position
1441003..1441674
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AA seq
223 aa
AA seq
DB search
MIEQEKAQDEVNQQYNQLITRQYDDVRQFRHDYQNILLSLDGFIKAEEWDQLRDYFERVL
DKHDIQTDDTNRQLGKLIYLQNADLRNLIYTKLLYAKSRGIVVNIEVSESMFIETDETLS
LPRMLGIILDNAIEEAAEIQHGELSVSLIQEELESLIIVENSCRVNIESLVTLKENGYST
KGAERGIGLFNLDRLVDKSMILLNTQINDQVFTQELIIPREVI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaagaaaaggctcaagatgaagttaatcaacaatataatcagttgattaca
aggcaatatgatgatgttcgtcagtttcgtcatgattatcaaaatatattgcttagtctt
gatggattcataaaagctgaagagtgggatcaattacgggattattttgaacgagtctta
gataaacatgacattcaaacagatgataccaatcggcaattaggtaaactaatttactta
caaaatgctgacttacgaaacttaatctatactaaactattatatgccaagtcacgaggg
attgttgtgaacattgaagtgtcagaaagtatgtttattgaaacagatgaaacattatca
ttgccacgtatgttaggcattattttagataatgccatcgaagaagcggcagaaattcaa
catggagagctatcggtttcgttaatccaagaagaattggagtccctaataattgtagaa
aactcttgccgagtaaatattgaaagtttagttacattaaaagaaaacggatattcaacc
aaaggggcagaacgagggattggactctttaacttagatagactagtagataagtctatg
atactgcttaatactcaaattaatgatcaggtgtttactcaagagctgatcatcccaaga
gaggtgatttga
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