Ruoffia tabacinasalis: VQP54_08220
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Entry
VQP54_08220 CDS
T10899
Name
(GenBank) phytoene/squalene synthase family protein
KO
K10208
4,4'-diapophytoene synthase [EC:
2.5.1.96
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf00906
Carotenoid biosynthesis
rtf01100
Metabolic pathways
rtf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
VQP54_08220
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rtf01006
]
VQP54_08220
Enzymes [BR:
rtf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.96 4,4'-diapophytoene synthase
VQP54_08220
Prenyltransferases [BR:
rtf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
VQP54_08220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
EF-hand_EFHB_C
Motif
Other DBs
NCBI-ProteinID:
WWL41446
LinkDB
All DBs
Position
1677314..1678183
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AA seq
289 aa
AA seq
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MSGFKKDYAYCEGIIKSSSKSFYTAFSQLPKDKARAVYAIYAFCRQADDTVDSSDPLQVK
KENLIVLKEELTAFSQGDTPDHPMWRALRDAFKRYSLDTAPFFDQLEGQKRDLDFQEIQT
MDDLKDYSYYVAGSVGLMLLPLLATKNGVTEEIVESGIALGIAMQLTNILRDIGEDYRDN
KRVYLPTNLLKNYDVDLKQVMVDGPNQNFIKLWEEIAKESQEGYETFWKTIHQFDEDCQL
PLLVAGKLYNAIMDAVRKNDYDCLGVRNYVPELKMVQLIMESKKILKNG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atcagcggctttaaaaaagattatgcttattgtgaaggaattattaaatcctcatcaaaa
agcttttatactgcattttcacagttgccaaaagacaaagcaagggcagtgtatgctatt
tatgccttttgtcgtcaagcagatgataccgtagacagctcagatcctttacaagtaaaa
aaggagaatttaattgtcttaaaagaagaattaacagctttttctcagggagacacaccg
gaccacccaatgtggcgcgctttacgcgatgcttttaaacgttatagtttagatactgct
ccttttttcgatcaacttgaagggcaaaaacgcgatttggattttcaagaaattcaaacg
atggatgatttaaaggattatagctattatgttgcgggttctgtgggcttaatgttgctc
ccacttttggcaacgaaaaatggtgtcaccgaggaaattgtagaaagtggtattgcttta
ggtatcgccatgcaactcacgaatatattaagggatatcggagaagattaccgagataat
aagcgcgtttatttaccaacaaatttattaaaaaactatgatgtggacttgaagcaagta
atggtagatgggcccaatcaaaattttattaaattatgggaagaaatagcgaaagagtct
caagaaggctatgaaacattttggaagactattcaccaattcgatgaagattgtcaatta
cccttacttgttgcgggtaaactatacaatgcgattatggatgctgttcgtaaaaatgac
tatgattgtcttggagtaagaaactatgtacctgaactcaagatggttcagctaatcatg
gagtctaaaaaaatattaaagaacgggtga
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