Ruoffia tabacinasalis: VQP54_08250
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Entry
VQP54_08250 CDS
T10899
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
rtf Ruoffia tabacinasalis
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtf03000
]
VQP54_08250
Transcription factors [BR:
rtf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VQP54_08250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_IclR
HTH_3
TetR_N
Glyco_hydro_3
HTH_10
HTH_7
HTH_24
HTH_31
HTH_38
HTH_5
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WWL39739
LinkDB
All DBs
Position
1681592..1682572
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AA seq
326 aa
AA seq
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MTTLNDIAKRAGVAKSTVSRYLNNGSVSDKTREKIQAIIEETGYVPNQFAQSLKAQHSNM
IGVVLPRFDSPSTNQVLKGIDDVAHEKGYQLMLTNSNLSIEREKENISLLKRQKVGGIIL
IASKMDEDLKKQVTQLSIPTLILGQKIEGVPSLVHQDYEAGRLIAEHALELGHTKILYVG
VTEEDNAVGVLRRNGFMDTVKEAGFEAAFHETSFSRKEAYQQALDYLPTTEATYIAAATD
HIAIGILNAANELNLSVPDDFSLSGFGGYSESDYTFPSITTIDYPFYDLGIKALNRIEQM
MKEDPVSLLETMPNQLNVKQSTKKIK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacattaaatgacatagcgaagcgtgcgggtgtggcaaaaagcacggtatcccgg
tatttaaataatggatctgtgagtgataagacacgtgaaaaaattcaagcaatcatcgaa
gaaacaggttatgtgccgaatcaatttgcccaaagtttaaaagcccagcactcaaatatg
attggtgtggttctgccaagattcgattccccatcgacaaatcaagtgttaaaagggatc
gatgacgttgcgcatgaaaaaggctatcagttaatgttaaccaattccaacttgagtatt
gaacgtgagaaagagaatatctctttattaaaaagacaaaaagtcggcggcatcattctc
atcgcgagcaagatggatgaggacttaaagaaacaagtcactcaattaagcattcccacc
ctcattttaggccaaaaaattgagggtgttccaagtcttgtccatcaagattatgaagcg
ggcagattgattgctgaacatgccttggaattagggcatacaaaaatattatacgtcggc
gtcacagaagaggacaatgcggtgggggttttgagacgaaatgggtttatggatacagta
aaagaagcaggttttgaagcagcattccatgagacgagcttctcaagaaaagaagcttat
caacaagctttagactatttaccaacgactgaggcaacttatatcgcggctgcaacggat
catatagcgatcggaatattgaatgcagccaacgaattaaatctatctgttccagatgat
ttttctttatccggttttgggggatatagcgaatctgattatacatttccaagtattacg
accatcgattacccattttatgacttagggattaaagcgttgaatcggatcgaacaaatg
atgaaagaggatccagttagcttactggagacgatgcccaatcaattaaatgtaaaacaa
tccactaaaaaaataaaataa
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