Ruoffia tabacinasalis: VQP54_10830
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Entry
VQP54_10830 CDS
T10899
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf03030
DNA replication
rtf03410
Base excision repair
rtf03420
Nucleotide excision repair
rtf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VQP54_10830 (polA)
03410 Base excision repair
VQP54_10830 (polA)
03420 Nucleotide excision repair
VQP54_10830 (polA)
03440 Homologous recombination
VQP54_10830 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtf03032
]
VQP54_10830 (polA)
03400 DNA repair and recombination proteins [BR:
rtf03400
]
VQP54_10830 (polA)
Enzymes [BR:
rtf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VQP54_10830 (polA)
DNA replication proteins [BR:
rtf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VQP54_10830 (polA)
DNA repair and recombination proteins [BR:
rtf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VQP54_10830 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VQP54_10830 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
ChrB_C
TGT
HHH_2
DUF7342
Motif
Other DBs
NCBI-ProteinID:
WWL40185
LinkDB
All DBs
Position
2173582..2176245
Genome browser
AA seq
887 aa
AA seq
DB search
MSQRKIMLIDGSSLAFRAFYSILDLDRFKNKSGLHTNALYSFHRMLDSVMEKFQPTHILV
AFDKSEVTFRTDMFKEYKGGRQKTPSEFKEQMPYLKVLLDAYGMKHYDILHYEADDVIGT
LSHQADSDDEVIVISGDKDLIQLATDNVTVYITRKGVSQLEAYTPETVMETYGVTPKQFI
ELKGLMGDPSDNYPGVTRIGEKTAIKLIKEYHSVEELYERLDELKPSKMKENLTNEKEEA
YMSRELAEILLEAPIEIGIDDITYEGKNIEELVEFYRQMEFNSFLTELQATSDVDITAIE
SDEPQLEYDVQFVDAITEDILPKQTAVYFETIGDNYHFDDVLYVSWYDQVANTVYVAEAS
VALTDTNFKAWLEDESVDKILFDSKRDEVLTSHYGIQLKGIIFDTLIAAYLVEANHMDEI
ANVVRALEVPVNVELDEMVYGKGAKRKLAEDTEVTVNHVASKAIALDALVEPLRTRLVDL
EMDDLYEDIEVPVARVLARMEIAGIKVDGATLEEKNEELIERLKQMEARIHEHAGEEFNV
NSPKQLGEILFDKMGLPVIKKTKTGYSTAANVLEKLLDKHPIIQEILDYRSISKLQGTYL
AGLPGYIKEDGKIHTKFVQTLTQTGRLSSADPNLQNIPVRLEEGRKIRQAFVPSEEGWQL
FGADYSQIELRVLAHISKEEHMTNDFIAGEDIHSATARRVFNLESTSDVDSNLRRQAKAV
NFGIVYGISDYGLSQNLNIPRPEAKEFIERYFEMYPGVQKFMDDIVEKAREDGYVSTLFH
RRRYLPDIKASNFNIRSFAERTAMNSPIQGTAADILKIAMIRLQKAIDDEGLQARILLQV
HDELILEAPAEEMERLSELVPEIMEHAANLDVPLEVDYNQGINWYEL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacgtaaaattatgctaattgacggaagtagtcttgcctttcgagctttttat
tcgattttagatttagaccgttttaagaacaaatcaggtctacacacgaatgccctttac
agctttcatcgaatgttagacagtgtcatggaaaaatttcaaccgacacatattttagtc
gcatttgataaaagtgaagtgactttcagaacagacatgtttaaagaatataaaggcggg
cgacaaaaaacgccaagtgaattcaaagaacaaatgccttatcttaaagtcttattagat
gcatacggaatgaaacattatgatatcttgcattacgaagcggatgatgtgattggaaca
ctgtctcatcaagcagattcggatgatgaagttattgttatttcaggagataaagactta
atccaactcgcaacagataacgttacagtttatattacccgtaaaggtgtaagtcagtta
gaagcttacacacctgagacagtgatggaaacttatggagtgactccaaagcagtttatt
gagttaaaaggtttaatgggagacccatcggataattacccaggtgtaacacgcatcggt
gagaagacggccatcaaattaatcaaagaatatcattctgtcgaagaattgtatgagcgt
ctagatgaattaaaaccatctaagatgaaagaaaatttaaccaatgaaaaagaagaagct
tacatgagtagagaattagctgaaatcttattagaagctccaattgaaattgggattgat
gacatcacttatgaaggaaagaatattgaagagctagttgaattttaccgtcaaatggaa
tttaatagtttcctgactgaacttcaagcgacgtcagatgtcgatatcacagcgattgaa
tcggatgaaccacaactcgaatacgacgtacagtttgtagacgcaatcacagaagatatt
ttacctaaacaaacagcggtatactttgaaactattggggacaattatcattttgatgat
gttttatatgtttcttggtatgatcaagttgcgaatacggtttatgttgctgaagcatct
gtggctttaactgatactaactttaaagcgtggctagaagacgaatctgttgataaaatt
ttattcgactcaaaacgagatgaagtcttaacaagtcattatgggattcaattaaaggga
atcatatttgatactttaattgcggcttacctcgttgaagcgaatcatatggacgagatt
gcgaatgtcgtcagagcgctagaagtaccagtgaacgttgagttagacgagatggtttac
ggaaaaggtgctaagcgaaaattagcagaagacacagaggtaaccgtaaaccatgtcgca
agtaaagccatagcattggatgcgttagtagagccattacgcactcgcttagttgattta
gagatggatgatctatacgaagacatcgaagtgccagtggcacgtgttcttgctcgcatg
gaaattgcgggaattaaagtagacggcgcaacattagaagagaagaacgaagaattaatc
gaacgattaaaacaaatggaagcgcgtattcacgaacacgcgggtgaagaatttaacgtg
aattcacccaaacaattaggtgaaattttattcgataagatgggcttgccagtcattaaa
aagacaaaaacaggttacagtacagcggcaaatgttcttgaaaaactgttagataagcac
ccaattattcaagaaattcttgattaccgttctatcagtaaacttcaaggaacttactta
gctggcctaccaggatatattaaagaagatgggaagatccatacgaaattcgttcaaaca
ttaacccaaacaggacgattaagtagtgcggatccaaacttacaaaatattccggtacgt
ttagaagaaggccgtaaaattcgtcaagccttcgttccttcagaagaaggttggcaatta
tttggtgccgactattcgcaaattgaactccgcgtacttgcgcatatcagtaaagaagaa
catatgacgaatgactttattgcgggtgaagatattcactcggctactgcaagacgtgta
ttcaatttagaatcgacgtcagatgttgatagtaacttacgtcgccaagctaaagctgta
aacttcggaattgtatatggaattagtgattacggattatcacaaaacttaaatattcca
agacctgaagcaaaagaattcattgaacgttactttgaaatgtacccaggtgttcaaaaa
tttatggatgacattgttgaaaaagctcgagaagatggctacgtcagcacattattccat
cgccgtcgatacttacctgacattaaggcaagcaacttcaatattcgttcattcgcagaa
cgaacagcgatgaactcaccaatacaaggaacagcagcagatatcttgaaaatcgcgatg
attcgtctacaaaaagccattgacgatgaaggacttcaagcaagaatcttattacaagtg
catgatgagttaatcttagaagcacctgcagaagaaatggaacgcttaagtgaactcgta
cctgaaattatggaacacgctgcaaacttagacgtacctttagaagtcgattataaccaa
ggaattaattggtacgaattatag
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