Ruoffia tabacinasalis: VQP54_11215
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Entry
VQP54_11215 CDS
T10899
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VQP54_11215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtf02000
]
VQP54_11215
Transporters [BR:
rtf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VQP54_11215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
AAA_30
SMC_N
Zeta_toxin
AAA_24
DO-GTPase2
TsaE
RsgA_GTPase
AAA_25
AAA_23
NTPase_1
MMR_HSR1
AAA_16
AAA_19
AAA_29
AAA_14
SRP54
nSTAND3
AAA_18
ResIII
cobW
Motif
Other DBs
NCBI-ProteinID:
WWL40251
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All DBs
Position
2245189..2246952
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AA seq
587 aa
AA seq
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MKEIKTFGNLWKYLKTYNKQLILALVLLIINVLMTVVEPFVLGLAITEITQNVVDIARGA
EGAAINYEYIITILIVYVIRGFIVQGTNYGSNVYITIAVQNMTRDLRDDIIRKIHRLPVA
YFDRNQFGDILGRITSDVETVSNSLQQGIIQVTTAFFSIIFVTIMMLTLNWQLALIVFIS
MPISYFIAQSVVKISQQHFKKQADVLGRMNGFVQENFTGFNIIRLYGREDSSVEEFRTIT
GELADIGFKASFLSSLMMPLVSVVSHLAYLVVAVVGGMFTIAGRLTVGNLQAFTQYVWQI
NQPIQMVTQITGLLQAAVAATQRIWEVLDQEEELNEVTEEIPSPVTGQVTFDDVSFQYTP
TKPLIRDFSVKVKPGETIAIVGPTGAGKTTMINLLMRFYDVDKGSIRLDGVDNRAVSRQK
YREQFGMVLQDAWLFEGTIKENLRFGNLDATDEQIVEAAKAANVDHFIRTLPGGYENRMN
QESSNISLGQKQLLTIARALLSDPKILILDEATSSVDTRLEQLIQKAMERLMEGRTSFVI
AHRLSTIQDADRILVMKDGQIIEHGNHEQLLEQKGFYYDLYQSQFNT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaataaaaacatttggaaacttatggaaatacttaaaaacatataataaacaa
ctaatcctagccctcgtactcttaatcattaacgttttaatgacagtggttgagccgttc
gtattaggattagctattacggaaattactcaaaacgtcgtggatatcgcccgtggagct
gaaggagcggcaatcaattatgaatatattattaccattctaattgtttatgtcattcgt
ggatttattgttcaagggacaaattatggatcgaacgtctacattacaattgcggttcag
aacatgacccgtgatttacgtgatgatatcatccgtaagattcaccgtctccccgtggct
tattttgaccgtaaccaatttggagatatcttaggacgtattactagtgacgttgagaca
gtttccaactcactgcaacaaggaataattcaagtgacaacggcattcttttcgattatc
tttgtcacgatcatgatgctgactttgaattggcaattagcgctcattgtctttattagt
atgccgatatcttactttattgctcaaagtgtagtgaagatttctcaacaacacttcaag
aaacaagcggatgtcttaggtagaatgaacggtttcgttcaagagaactttactgggttt
aatattattcgtttatatgggcgtgaagatagttctgtagaggagttccgtacgattacg
ggagagttagcagatatcggctttaaagcaagcttcttatcaagtttaatgatgccctta
gtatccgtcgtatctcacttagcttacttagttgttgcggtggtcggtggtatgttcacg
attgcaggacgcctaacagttggtaacttacaagcctttactcaatatgtatggcaaatt
aaccaaccgattcaaatggtgactcaaattacggggttattacaagcggctgttgctgca
acgcaacgtatttgggaagtattagaccaagaagaagaattgaacgaagtaacggaagaa
ataccttcacctgttacagggcaagtgactttcgatgatgtttctttccaatacactcca
acaaaaccattaattagagatttctctgtaaaggttaaaccgggtgaaacgattgcgatt
gtcggtccaacaggtgcaggtaagacaacgatgattaacttactgatgcgcttttatgat
gtggataaagggtcgattagattggacggcgtagataaccgagccgtttcaagacaaaaa
tatcgcgagcaattcgggatggtattacaagatgcttggttgttcgaaggaacgattaaa
gaaaatttacgtttcggtaatttagatgcgacagacgagcaaattgttgaagctgccaaa
gcggctaacgtggatcattttatccgtacgttaccaggtggttatgagaatcgtatgaac
caagagtcgagtaacatttctctcggtcaaaaacaattactaacgattgcacgtgcttta
ttatctgatcctaaaatcttgattctagacgaggcgacaagttcggttgatacgcgtcta
gagcagttgattcaaaaagcgatggaacgcttaatggaagggcgtacgagtttcgttatt
gcccaccgcctttcaaccatccaagatgccgatcgtatcttagtgatgaaagatggtcaa
atcattgaacatggtaaccatgagcaattattagaacaaaaaggcttctactatgactta
tatcaaagccaatttaatacttaa
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