Ruoffia tabacinasalis: VQP54_11540
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Entry
VQP54_11540 CDS
T10899
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VQP54_11540 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtf03400
]
VQP54_11540 (xseA)
Enzymes [BR:
rtf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
VQP54_11540 (xseA)
DNA repair and recombination proteins [BR:
rtf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VQP54_11540 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2937
DacZ_A
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
WWL40313
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All DBs
Position
2302639..2304021
Genome browser
AA seq
460 aa
AA seq
DB search
MSEKNQEYLTVQALTKYIKRKFDVDPHLQRVFVVGEVSNFRLRPNSHQYFSLKDEGARIS
AVMYRSAFQRVKFNIEEGMKVFVTGKITLYEPSGAYQIVIDSIQPDGIGALYQQLEQLKE
KFKKAGLFDRPKLPIPRFPKKIAVITSPSGAVIRDIITTINRRYPIVEITVIPTRVQGKE
AAGEIVAAFNKVKDRQDEFDTVIVARGGGSIEDLWCFNDEQVAMAILNCPLPVISSIGHE
TDTTLSDLVADIRVATPTAAAEIAVPVLQEVLTYLTQMEERVFYSMNQRIQYMRKYYERF
AQSYVMTQPERLYQPYMQQLDLAIERLNNNKDNYFTEQKNQVNVLKQRLSLQQPQGLINQ
YQKDLTAFTKQLNRNMEQYQYNKKVVFGNLMQLLDAYSPLKSVQRGYAVVTSKDNIVKHI
TEVEKDDMIKVNLSDGQIEAQVTKTSTDNIFQQLSDTEKE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaaatcaagagtacttaacggtacaagcgttaaccaaatatataaaaaga
aaatttgatgtcgatccgcatttacaacgagtgtttgttgtaggagaggtgtcaaatttt
cgcttgagacccaattcccatcaatattttagcttgaaagatgaaggggcaagaattagt
gcagtgatgtatcgttcggcttttcaacgcgttaagttcaatattgaagaagggatgaaa
gtattcgttaccggaaagattactttatatgaaccttctggagcgtatcaaattgtgatt
gatagcattcaaccagatggaattggagctttataccaacaactagaacaattaaaagaa
aaattcaaaaaagctggtctatttgatcgacctaaattaccaattccacgctttcctaag
aaaatcgcggttatcacgagtccaagtggagcagtaattcgcgatattattacgaccatc
aatcgtcgctatcccatcgttgaaatcacagtcattccaacccgggtacaaggtaaagaa
gccgcgggtgaaatcgtcgcagcctttaataaagttaaagataggcaagacgagtttgac
acagtcattgttgcacgtgggggaggttccatagaggatctttggtgctttaatgacgaa
caagtcgcaatggctattctaaattgtccgcttccagtaatatcttcaattggtcacgaa
acagatacaaccttgtctgatcttgtggctgacattcgagttgcaaccccaactgctgcg
gctgaaattgccgtaccagtcttacaagaagtattaacttacttaactcagatggaagag
cgcgtattttattcaatgaatcaacgcattcaatatatgcgaaagtattatgagcgcttt
gcccaatcttatgttatgactcaacctgagcgactatatcaaccatacatgcaacagcta
gacttagcgatcgaaagattgaataataacaaagataattactttacggagcaaaagaat
caagtaaacgtgttaaaacaacgactgtccttacaacaaccgcaagggcttattaatcaa
taccaaaaagatttaacggcttttacgaaacaattaaatcgtaatatggaacaatatcaa
tacaataagaaagttgtctttggtaatctcatgcaattgcttgatgcatatagcccatta
aagagcgttcaaaggggttatgctgtcgtgacatcaaaagataacattgtaaaacatatc
actgaagttgaaaaagatgatatgattaaggtgaatttaagtgatggacaaatcgaagcg
caagtaacaaaaacatccacagacaatatatttcaacagctttctgatacagagaaggag
taa
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