Ruoffia tabacinasalis: VQP54_11550
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Entry
VQP54_11550 CDS
T10899
Name
(GenBank) farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rtf Ruoffia tabacinasalis
Pathway
rtf00900
Terpenoid backbone biosynthesis
rtf01100
Metabolic pathways
rtf01110
Biosynthesis of secondary metabolites
Module
rtf_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rtf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VQP54_11550
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rtf01006
]
VQP54_11550
Enzymes [BR:
rtf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
VQP54_11550
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
VQP54_11550
2.5.1.29 geranylgeranyl diphosphate synthase
VQP54_11550
Prenyltransferases [BR:
rtf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
VQP54_11550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
DUF1804
Staph_opine_DH
Motif
Other DBs
NCBI-ProteinID:
WWL40315
LinkDB
All DBs
Position
2304254..2305138
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AA seq
294 aa
AA seq
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MIKQDLKDLRNVFETELDKHIRLLQTPIEMLKPMIYSLKGGGKRLRPLLLLAILNAESEK
HMKKGATTAVALEFIHTYSLIHDDLPAMDNDDLRRGQPTAHIKFDEATAILAGDALLTDA
FSLISDDSKLKSKQKVKIISLLSSAAGSHGMVAGQLGDMQAENKEITLEELNRIHEFKTG
KLFTFATQAAAIIGEFSPEIEELLVNFGETFGVLYQIHNDLLDVIDDSTLSGKGHSSDEF
NKKSTYPNLLGLEESKEVLGQEREKAEKIIEKITKLSGTDYSILNKFLSFTDID
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaagatttaaaggatttaagaaatgtatttgaaactgaattagacaaacat
atacgccttcttcaaactccgattgaaatgttaaaaccaatgatttattcattaaaaggt
ggcggcaaacgactacgtccgttactattgctggctatcttaaatgcagaatcagagaaa
catatgaaaaaaggagcaactacagctgttgctttagaatttattcatacgtattcttta
attcatgatgatttaccagcgatggacaatgatgacttgagacggggtcaaccaaccgct
catattaaatttgatgaagcgacagctatcctagcaggggatgcattattaacggatgca
ttcagtttaattagcgacgattcaaaattaaagagcaaacaaaaagttaaaattatttct
ttactgagttctgccgcaggttcacacgggatggtcgctggccaattaggtgatatgcaa
gcagagaataaagaaataacgttagaagaattaaatcgaatacatgaatttaaaacaggt
aaattatttacctttgcgacacaagccgcagccattattggagaattcagtcctgaaatt
gaagaattattagtaaactttggtgaaacctttggcgttttataccaaattcataatgat
ttacttgatgtgattgatgacagtacgttatctggaaaaggacattcaagtgatgaattc
aacaagaaatcaacctatccaaacttacttggtttagaagaatcaaaagaagttttaggt
caagaacgtgaaaaagctgaaaaaattattgaaaaaattactaagttgagtggaacggat
tacagtattttaaataaatttctctcattcacagatatagactaa
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