Raoultella terrigena: NCTC13098_00668
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Entry
NCTC13098_00668 CDS
T06046
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rtg
Raoultella terrigena
Pathway
rtg02020
Two-component system
rtg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC13098_00668
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC13098_00668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtg03021
]
NCTC13098_00668
Transcription machinery [BR:
rtg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC13098_00668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
VDR24381
UniProt:
A0A3P8KEM8
LinkDB
All DBs
Position
1:complement(563217..564017)
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AA seq
266 aa
AA seq
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MTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHEEVETKEVEDRESLDTVDALE
QKDMPEELPLDASWDEIYTAGTPSGNGVDYQDDELPIYQGETTQSLQDYLMWQVQLTPFT
DTDRAIATSIVDAVDDTGYLTLRVEDIVESIDDDEIGLEEVEAVLKRIQRFDPVGVAAKD
LRDCLLVQLSQFAKETPWLEEARLIISDHLDLLANHDFRSLMRVTRLKEDVLKEAVNLIQ
SLDPRPGQSIQTSEPEYVIRMCWCVR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacaactgcagcaggccattcgtttgctgcagctgtccacgttagaactccag
caggaactccagcaggcgctggagagtaatccgttgcttgagcaaaccgatcttcatgaa
gaggtagaaacaaaagaagttgaggaccgcgagtctctggataccgtggacgcccttgag
caaaaagatatgcccgaggagctgccgctcgacgccagctgggatgagatctacaccgcc
ggcacgccttctggtaacggcgtcgattaccaggatgacgagctgcctatctatcaaggt
gaaacgacccagagcctgcaggattacctgatgtggcaggttcagctaacgccgttcacc
gataccgaccgcgctatcgccacctctatcgtcgatgccgttgatgataccggctacctc
accctgcgggtggaggatatcgttgagagcattgacgatgacgaaatcggcctcgaagaa
gttgaagcggtactgaagcgcatccagcgctttgacccggttggcgtcgcggcaaaagat
ctgcgcgactgtctgctggttcagctttcgcagtttgccaaagagacgccgtggctggaa
gaggcccggcttatcatcagcgatcatctcgatctgctcgccaaccacgactttcgctcc
ctgatgcgcgttacgcggctgaaagaggacgttctgaaagaagcggttaatcttatccag
tcgttagatccgcgcccgggtcagtcgatccaaaccagcgaaccggaatacgtgatccgg
atgtgctggtgcgtaaggtga
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