Raoultella terrigena: NCTC13098_00717
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Entry
NCTC13098_00717 CDS
T06046
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rtg
Raoultella terrigena
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtg03016
]
NCTC13098_00717 (truB)
Enzymes [BR:
rtg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC13098_00717 (truB)
Transfer RNA biogenesis [BR:
rtg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13098_00717 (truB)
Prokaryotic type
NCTC13098_00717 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
VDR24426
UniProt:
A0A3P8M006
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All DBs
Position
1:594476..595420
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPLTFSDAQLASALEDFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIDVPREARPITVYELLFIRHEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLAVSKYPVERMVTLEQLQALVEQAQEQDIPAAQLLDPL
LMPMDSPASDYPLVNIPETSAVYFKNGNPVRTSGAPKQGLVRVTEGEDEKLLGMGEIDDE
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggccgcgatgtgcacggcgtgctgttgctggataaaccc
cagggggcttccagcaatgacgtactgcaaaaagtaaaacgtatttataacgctaaccgg
gcagggcacaccggcgcgctggatccgctggcaaccggcatgctgccgatttgcctcgga
gaagcgaccaagttttcccagtacctgctcgattctgacaagcgttaccgcgtcattgcc
aaactgggtcaacgcactgacacctctgatgccgatggccaggttgtggaagagcgcccg
ctgacctttagcgacgctcagctggcctccgcgctggaagattttcgtggcgacactcag
caggtgccgtccatgtattcggcgctgaagtaccagggtaaaaagctgtatgaatatgcc
cgtcaggggattgacgtcccgcgcgaagcccggccgattaccgtctacgagctgctgttt
attcgccatgaaggcgatgagctcgagctggaaatccactgttcaaaagggacctatatt
cgtacgattatcgacgatttaggcgaaaagctaggctgtggcgcgcacgtgattttcctg
cgccgcctggccgtcagcaagtatcctgttgaacgtatggtgacgctcgaacagctgcag
gcgctggttgaacaggcgcaggagcaggatattcctgccgcgcagctgctcgatccgctg
ctgatgccgatggacagcccggcgtcggattatccgttggttaatattcccgaaacgtcg
gcggtatactttaaaaacggtaatccggtgcgcacttctggcgcgccgaagcaggggctg
gttcgcgtaacggaaggcgaagacgagaagcttctcggcatgggcgagattgatgacgaa
ggccgcgtggcgccgcgtcgtctggtcgttgaataccctgtctga
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