Raoultella terrigena: NCTC13098_00720
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Entry
NCTC13098_00720 CDS
T06046
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rtg
Raoultella terrigena
Pathway
rtg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13098_00720 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtg03019
]
NCTC13098_00720 (pnp)
03016 Transfer RNA biogenesis [BR:
rtg03016
]
NCTC13098_00720 (pnp)
Enzymes [BR:
rtg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC13098_00720 (pnp)
Messenger RNA biogenesis [BR:
rtg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC13098_00720 (pnp)
Transfer RNA biogenesis [BR:
rtg03016
]
Prokaryotic type
tRNA degradation factors
NCTC13098_00720 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
VDR24427
UniProt:
A0A3P8JMB5
LinkDB
All DBs
Position
1:596079..598214
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQTINDLVKEAGKPRWEWQPEVVDA
ALNARVAALAEARLSDAYRITDKQERYAQIGVIKAETIATLTAEDETLDANELGEILHAI
EKNAVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGDRTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTTEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKASVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKALHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTQPVSAPEVPVAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatccgatcgttcgtaaattccagtacggccaacacaccgttaccctggaaacc
ggcatgatggcccgccaggccactgctgctgtcatggtaagcatggatgacaccgcggta
ttcgttaccgttgttggccagaagaaagcgaagccaggccaggacttcttcccgctgacc
gtaaactatcaagaacgtacctatgcagcaggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggttttgttaacgaagttcaggttattgcgaccgttgtttccgtt
aacccacaggttaacccggacatcgttgccatgatcggtgcttccgctgcgctgtccctg
tccggtattccgtttaacggtcctatcggctccgcgcgcgttggctacatcaacgaccag
tacgtactgaacccgactcaggatgagctgaaagagagtaagctggacctggttgttgcc
ggtaccgaagctgcggtcctgatggttgaatctgaagcagaactgctgagcgaagaccag
atgctgggcgcggtggtgttcggccacgagcagcagcagattgttattcagaccatcaac
gatctggtgaaagaagcgggtaaaccgcgctgggaatggcagccggaagtcgtagacgcc
gcgctgaatgcacgcgttgcagccctggctgaagctcgcctgagcgatgcttaccgcatc
actgacaaacaagagcgctatgctcagattggcgtgatcaaagctgaaactatcgccacg
ctgaccgctgaagatgaaaccctggacgctaacgagctgggcgaaattctgcacgctatc
gagaaaaatgccgttcgtagccgcgtactggcaggcgagccgcgcatcgatggccgtgaa
aaagatatgattcgtggtctggacgttcgtaccggcgtactgccgcgtacccacggttcc
gcactgttcacccgtggcgaaactcaggcgctggttaccgcgaccctgggcaccgcgcgt
gacgcacagaacatcgatgagctgatgggcgatcgtaccgactccttcctgttccactac
aacttccctccgtactccgtaggcgagaccggaatggtgggttcaccgaagcgtcgtgaa
attggtcacggtcgtctggctaagcgcggcgtgctggccgtgatgccgaccaccgaagag
ttcccgtacaccgttcgcgtggtttctgaaatcaccgaatctaacggctcttcttccatg
gcttccgtttgcggcgcatctctggcactgatggacgccggcgtgccgattaaagcctcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactatgtcgttctgtccgat
attctgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggctcccgcgac
ggtatctctgctctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgctgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtaatggagcaggcg
attaacgcgccgcgcggcgacatctcagaattcgcaccgcgtatccacaccatcaagatc
agcccggacaagatcaaagacgttatcggtaagggcggctccgtcatccgtgcgttgact
gaagaaaccggcacaaccatcgaaatcgaagacgacggtaccgtgaaaatcgcagcgacc
gacggcgacaaagcgctgcacgcgattcgtcgtatcgaagagatcaccgctgagatcgaa
gttggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggcggcggtaaagaaggtctggtgcatatttctcagatcgccgacaagcgcgtagag
aaagtcaccgattacctgcagatgggtcaggaagtgccggttaaggttctggaagttgac
cgtcagggccgcgttcgcctgagcatcaaagaagcaactgagcagactcagcctgtcagc
gcaccggaagttccggtcgcagagcagggcgagtaa
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