Raoultella terrigena: NCTC13098_00811
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Entry
NCTC13098_00811 CDS
T06046
Symbol
lsrA
Name
(GenBank) Autoinducer 2 import ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
rtg
Raoultella terrigena
Pathway
rtg02010
ABC transporters
rtg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC13098_00811 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC13098_00811 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtg02000
]
NCTC13098_00811 (lsrA)
Transporters [BR:
rtg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
NCTC13098_00811 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
MukB
AAA_22
RsgA_GTPase
DPOA2_OB
AAA_29
ABC_ATPase
TniB
AAA_30
AAA_28
ATP-synt_ab
AAA_23
Motif
Other DBs
NCBI-ProteinID:
VDR24517
UniProt:
A0A3P8JMJ7
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All DBs
Position
1:667007..668494
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AA seq
495 aa
AA seq
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MKPLLEARQICKQFSGISVLKAIDFTLFSGQVHALMGGNGAGKSTLMKIVAGVETPDSGE
LALGGGTFTRLTPALAHQQGVYLVPQEPMLFPNLTVRENILFRLPKRADSAAQLQEKLQQ
LSCQLNLDAAASTLEVADQQMVEILRGLMRKAQILILDEPTASLTPGETARLFCQIRALQ
DLGVGIVFISHKLPEIRQIASHVSVMRDGAVVLSGHTADYSDNQLVSAMTPADREHALSD
TQKLWLALPGNRRTQPQDFPVLRVEDLTGEGFIDLNLEIYAGEIVGLAGLVGSGRTEFAE
TLYGLRPPRAGRVWLENRDISDASVRARLAGGLVYLPEDRQVSGLFLDAPVRWNTVMFNQ
PSLWQQDKREAAVVERYHRALGIKFADSDQPVRTLSGGNQQKVLLARCLEANPLLLIVDE
PTRGVDVSARADIYQLLKSVAAQNVAVLMISSDLDEFVGLADRVLVMHQGRQSGELTRQA
VTVERMMTLAFGGAA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactgcttgaagcccgccaaatctgcaaacagttctccggcattagcgtgctg
aaggcgattgatttcacgttattttccggccaggtgcacgccctgatgggcggcaacggc
gccgggaaatcgacgctgatgaagattgtcgccggcgtagaaacccccgacagcggcgag
ctggccctcggcggaggcacctttacgcgcctgacccccgcgctggcccatcagcagggc
gtctatctggtgccgcaggagccgatgctgttccctaacctgacggtgcgggaaaacatt
ctgttccgcctgccgaagcgcgccgatagcgccgcgcagctgcaggaaaagctgcagcag
ctcagctgccagctgaatctcgacgcggcggccagcaccctggaggtggcggatcagcaa
atggtcgagatcctgcgcggcctgatgcgcaaagcgcagatcctgatcctcgacgagccc
accgcctccttaacgccgggcgaaacggcgcgtctgttttgccagatccgcgcgctgcag
gatctcggcgtcggcatcgtctttatctcccacaagctgccggagatccgccagatcgcc
agccacgtctcggtcatgcgcgacggcgcggtggtgctgagcgggcacaccgccgactac
agcgacaatcagctggtgagcgccatgacgcccgccgaccgggagcatgccctcagcgat
acgcagaagctatggctggcgctgccgggcaaccgacgtacccagccgcaggatttcccg
gtgctgcgggtggaggatctcaccggcgagggctttatcgatctaaaccttgagatctac
gccggggagatcgtcggcctcgccgggctggtgggatccgggcgcaccgaatttgccgaa
accctttacggcctgcggccgccgcgggcggggcgggtctggctggagaaccgcgacatc
agcgacgccagcgtccgcgcgcggctggccggcgggctggtctatctgccggaagatcgt
caggtttccggactgtttctcgacgcgccggtgcgctggaacacggtgatgtttaaccag
ccgtcgctgtggcagcaggataaacgcgaggccgcggtggtggagcgctatcaccgggcg
ctggggatcaaatttgccgatagcgaccagccggtgcgcaccctctccggcggtaaccag
cagaaggtgctgctggcgcgctgtcttgaggcgaacccgctgctgctgatcgtcgacgag
ccgacgcgcggcgtggacgtctccgcccgcgccgatatctaccagctgctgaaaagcgtt
gccgcgcagaacgtggcggtgctgatgatctccagcgatctggacgagttcgttggcctg
gccgaccgggtgctggtgatgcatcagggccgacagagcggcgaactgacgcggcaggcg
gtgaccgttgaacgcatgatgacgctggcatttggaggagcggcatga
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