Raoultella terrigena: NCTC13098_01295
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Entry
NCTC13098_01295 CDS
T06046
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rtg
Raoultella terrigena
Pathway
rtg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC13098_01295 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtg03400
]
NCTC13098_01295 (recC)
Enzymes [BR:
rtg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC13098_01295 (recC)
DNA repair and recombination proteins [BR:
rtg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13098_01295 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
VDR24994
UniProt:
A0A3P8IS06
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All DBs
Position
1:1073879..1077121
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AA seq
1080 aa
AA seq
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MLRVYHSNRLDVLEALMEFIVERQRLEDPFKPEMVLVQSTGMAQWLQMTLAKRFGIAANI
EFPLPASFIWDMFVRVLSDIPGESAFSKQSMSWKLMTLLPQRLDDEAFALLRHYLSDDSD
KRKLFQLAARVADLYDQYLVYRPEWLMRWEADERVDGLGDAQQWQAPLWKALVEHTAALG
QPLWHRANLYQRFISALETADEPPAGLPSRVFICGISALPPVYLQALQALGKHVDVYVLF
TNPCRYYWGDIKDPAFLAKLMSRQRRHHREPRELPLFRDAKQAPGLFNDDGEQDVGNPLL
ASWGKLGRDYIYLLAGLERYEELDAFVDIAPDNLLHNLQSDILELRNAAVAGRTAQEFAH
SRSKRLLAPNDRSLSIHVCHSPQREVEVLHDRLLAMLEENPDLTPRDIIVMVADIDSYSP
YIQAVFGAASGERWLPWAISDRRARESHPALQAFITLLSLPDSRFASEDVLALLDVPVLA
ARFNIDEEGLRYLRQWVNESGVRWGMDDDNVRELDLPATGQHTWRFGLTRMLLGYAMDSS
QGEWQSVLPYDESSGLIAELVGNLASLLMQLNLWRRGLAQERPLAEWLPVCRDLLDDFFL
PDSETEAALALIEQQWQAAIGEGVQAQYTQTVPLSLLRDELAQRLDQQRISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRALAPLGFDLMSQKPQRGDRSRRDDDRYLFLEAL
MSAEQKLYISYIGRSIQDNSERYPSVLVQELADYIGQSHCLAGDEELDCDASERRVKAHI
THLHSRMPFDTANFRDDEDQSYAREWLAAASQQGEAHGDFIQPLPAAEIESLPFEQLLRF
WQHPVRAFFQQRLRVNFRSEESEIPDDEPFTLEGLSRYQLNQQLLNTLIEQQDASVMYRR
FRAAGELPYGAFGELAWETQRQEMQNLAERVVASRQPGQSMEIDLQCNGVNVTGWLQQVQ
SDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGTGTSRLLVRKEGEWRFPPLAQEQAKAYL
DELVDGYLQGMSKPLLLLPESAGAWLKACYDAEKGCHVNGRRDATKSAQQVCGRRMKAIW
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtgtaccactcaaaccgtctggacgtacttgaagcgctgatggagtttatc
gtcgagcgccagcggctggaggaccctttcaagccggaaatggtgctggtgcaaagtacc
ggcatggcgcaatggctgcagatgacgctggcaaaacgcttcggtattgccgccaacatc
gagtttcctctcccggcgagctttatctgggatatgtttgtgcgcgtgctctccgatatc
cccggtgaaagcgcgtttagcaaacagagcatgagctggaagctgatgaccctgctgccg
cagcgcctggatgacgaagccttcgccctgctgcgccactacctcagcgacgacagcgac
aagcgtaagctatttcagctggccgccagagtggcggatctctacgaccagtatctggtc
tatcgtccggaatggctgatgcgctgggaagccgacgagcgcgttgacggcctcggagac
gcccagcagtggcaggcgccgctgtggaaagcgttagtcgagcataccgccgcgctgggg
cagccgctgtggcaccgcgccaacctgtatcagcgttttatcagcgcgcttgagaccgcg
gatgagccgccggccgggctgccgtcgcgggtctttatatgcggcatctcggcgctgccg
ccggtctacctgcaggcgctgcaggcgctcggcaaacacgttgatgtttatgtccttttc
actaacccgtgccgctactactggggggatatcaaagatcccgcttttctggctaagctg
atgtcgcgccagcgtcgtcaccatcgcgagccgcgagagctgccgctatttcgcgacgca
aaacaggctcccggcctgtttaacgacgacggcgagcaggatgtgggcaacccgctgctg
gcctcctggggcaagctgggacgggactacatctatctgctggccgggctggagcgttac
gaagagctggacgcattcgtagatatcgccccggataacctgctgcataacctgcagtct
gacatcctcgagctgcgcaacgcggcggtggccgggcgcacggcgcaagagtttgcccat
agccgcagcaagcgcctgctggccccaaacgatcgcagcctcagcatccacgtttgccat
agcccgcagcgcgaggtggaagtgctgcacgaccggctgctggcgatgctggaggagaac
cccgacctcacgccgcgcgacattatcgtgatggtggcggatatcgacagctacagcccc
tacatacaggcggtgttcggtgccgccagcggcgagcgctggctgccctgggccatctcg
gaccgccgcgcccgcgaatcgcacccggcgctgcaggcgtttattacgctcctttctctg
cccgacagccgctttgccagcgaagacgtgctggctctgctggatgttccggtgctggcg
gcacgatttaatattgatgaagaagggctgcgctacctgcgtcagtgggtcaacgaatcc
ggcgtgcgctggggcatggatgacgataacgtgcgcgagctggatctccccgccaccggg
cagcacacctggcgttttggcctgacgcggatgctgctgggctacgcgatggacagcagc
cagggcgaatggcagtcggtgctgccgtacgacgagtccagcgggctgattgccgaactg
gtgggcaacctggcgtcgctgctgatgcagctcaacctttggcggcgcggcctggctcag
gagcgcccgctggcggagtggctgccggtttgtcgcgatctgctcgacgacttcttcctg
cccgatagcgaaacggaagccgcgctggcgctgattgaacagcagtggcaggcggcgatc
ggcgaaggcgtccaggcgcagtatacgcagacggtgccgctctctttgctgcgcgatgag
ctggcgcagcgcctcgaccagcagcgcatcagccagcgttttctggccgggccggtcaac
atctgtaccctgatgccaatgcgttctattccattcaaagtcgtctgtctgctggggatg
aatgacggcgtttacccccgcgccctggcgccgctaggctttgacttaatgagccagaag
ccgcagcgcggcgaccgcagccgccgcgatgatgaccgctacctgttcctggaagcgctg
atgtcggccgagcagaagctctatatcagctatatcggccgttcaatccaggacaatagc
gaacgctacccgtcggtgctggtacaggagctggcggattatatcggccagagccactgc
ctggcgggcgatgaggagctggactgcgatgccagcgagcggcgggtcaaagcgcatatt
acccatctgcatagccgcatgcccttcgatacggccaacttccgcgacgatgaagatcaa
agctacgcccgggagtggctggccgccgccagccagcagggggaggcgcatggcgacttt
atccagccgctgccggcggcggaaatcgaaagcctgccgtttgagcagctgctgcgcttc
tggcagcacccggttcgcgccttcttccagcagcggctgcgggtcaacttccgctccgag
gagagcgaaatcccggacgatgagccgttcaccctcgaagggctgagccgctaccagctc
aaccagcagctgctgaatacgctcattgaacagcaggatgcctcggtgatgtaccgccgc
ttccgtgcggcgggcgaactgccctacggcgccttcggcgaactggcctgggagacccag
cgccaggagatgcagaacctcgcggagcgggtagtcgccagccgccagccgggacaaagc
atggaaatcgatctgcaatgtaacggtgtcaacgttaccggatggctgcagcaggtacaa
tctgacggcctgctgcgctggcggccttcgctgctcagcgtggcgcagggaatgcaactt
tggctggagcaccttgtctactgtgctagcggcggaaccggcaccagccgcctgctggtg
cgcaaggaaggcgaatggcgtttcccgccgctggcgcaggagcaggcgaaggcctatctt
gatgagctggttgacggctatctgcagggcatgtcaaaaccgctgctgctgctacctgaa
agcgcgggggcatggctaaaagcctgttatgacgctgaaaaaggatgtcatgttaatgga
cgtcgagacgcaacaaaaagcgcgcagcaagtttgtggcaggcgtatgaaggcaatatgg
tga
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