Raoultella terrigena: NCTC13098_02079
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Entry
NCTC13098_02079 CDS
T06046
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
rtg
Raoultella terrigena
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtg03400
]
NCTC13098_02079
DNA repair and recombination proteins [BR:
rtg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NCTC13098_02079
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
Zn_Ribbon_1
DUF7577
UPF0547
Motif
Other DBs
NCBI-ProteinID:
VDR25747
UniProt:
A0A3P8JQU6
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All DBs
Position
1:complement(1697226..1698830)
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AA seq
534 aa
AA seq
DB search
MLVLAHVKELVAQNHAKYLALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLEQFQGEF
SLLIVDECHRISDDDDSQYQQIITHLRQVNPQLRLLGLTATPFRLGKGWIYQFHYHGMVR
GDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNHEL
KKQQRITPHIVSQIVEFAQTRKGVMIFASTVEHAREITGLLPAGEAELITGETPGPQRDR
IIESFKAQRYRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDC
LILDYAGNPHDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRC
QGWFEDDDGHREQCDFRFRFKHCPQCNAENDIAARRCRECDTILVDPDDMLKAALKLKDA
LVLRCSGMDLQHGADDKGPWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTP
GVPLRWITAADILAQRALLRHPDFVVARMKGQYWQVREKMFDYQGRFRRANELR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgctggttctggcgcacgtcaaagagctggtggcgcaaaaccacgctaaatatcttgcc
cttgggctggaagccgatatttttgccgcagggctgaagcggaaagagagccacggtaag
gtggttttcggcagcgtgcagtcggttgcccgcaatcttgagcagttccagggcgagttt
tcgctgctaatcgtcgatgagtgccaccgcatcagcgatgacgacgatagccagtaccag
caaattatcacccacctgcggcaggtcaatccgcagctgcgcctgcttgggctcaccgcc
acgccgtttcgcctcggcaagggctggatttatcagttccattatcatggcatggtgcgc
ggcgacgagaaggcgctgtttcgcgactgcatctatgaactgccgctgcgctacatgatt
aaacacggctatctgacgccgccggagcggctcgatatgccggtagtgcagtacgatttc
agccgccttcaggcgcagagcaacggcctgttcagcgaagctgacctcaatcacgagctg
aaaaaacagcagcgcattacgccgcatatagtcagccagatcgttgagttcgcccaaacg
cgaaaaggggtgatgattttcgcttctacggtggagcacgcgcgggaaatcaccggtctg
ctgcccgcaggcgaggccgagctgattaccggcgaaacgcccggcccgcagcgcgaccgc
attattgaatcgtttaaagcccagcgttaccgctatctggtcaacgtggcggtgctgacc
accggctttgacgccccgcatgtcgatcttatcgccattctgcgtccgaccgaatcggtc
agcctctatcagcagatcgtcggtcgcggcctgcgcctggcgccgggaaaaaccgactgc
ctgatcctcgactatgccggcaacccgcacgacctctacgcgcccgaagtcggggcgcct
aaaggtaagagcgacaacgtgccggtgcaggtcttctgcccggcctgcggttttgccaat
accttctggggcaaaaccaccgccgacggcacgctgatcgaacattttggccgccgctgt
cagggctggtttgaggatgatgacggccatcgcgagcagtgcgactttcgttttcgcttt
aagcactgcccgcagtgtaatgcggaaaacgatatcgccgcccgccgctgccgcgagtgc
gacacgatcctcgtcgatcccgatgatatgctgaaagcggctctgaagcttaaagacgcg
ctggtgctgcgctgcagcggcatggatctgcagcacggcgccgacgacaaaggcccgtgg
ctgaaaattacctactacgatgaagacggcgccgacgtcagcgagcgctttcgcctgcag
acgcccgcccagcgcaccgcgtttgaacagctgtttattcgcccgcacacccgtacgcca
ggcgtgccgctgcgctggataaccgctgccgatatccttgctcagcgggcgctgctgcgc
catccggactttgtcgtcgcccgcatgaaggggcaatactggcaggtgcgggaaaaaatg
ttcgactaccagggccgcttccgccgggccaacgaactgcgttaa
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