Raoultella terrigena: NCTC13098_02225
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Entry
NCTC13098_02225 CDS
T06046
Symbol
degA_1
Name
(GenBank) Degradation activator
KO
K03435
LacI family transcriptional regulator, fructose operon transcriptional repressor
Organism
rtg
Raoultella terrigena
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtg03000
]
NCTC13098_02225 (degA_1)
Transcription factors [BR:
rtg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NCTC13098_02225 (degA_1)
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GFIT
Motif
Pfam:
LacI
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
HTH_3
HTH_26
IF2_N
MarR_2
EZH2_WD-Binding
HTH_31
HTH_10
Motif
Other DBs
NCBI-ProteinID:
VDR25892
UniProt:
A0A3P8KV49
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Position
1:1836165..1837175
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AA seq
336 aa
AA seq
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MKKITIYDLAELSGVSASAVSAILNGNWKKRRISAKLAEKVTRIAEEQGYAINRQASMLR
SKKSHVIGMIVPKYDNRYFGSVAESFEEMARERGLLPIITCTRRRPELEIEAVKAMLSWQ
VDWVVATGATNPDKITELCQQAGVPTVNLDLPGTIAPSVISDNYVGARALTDKILDNSLR
RHGSLAPLTFVGGRSSDHNTLERLRGFHDAHRARGLSVPAENIIAPGYSKGKVEASMQAR
FGAPDEHLQGFFVNSTISLEGVVRWLAQRGLTGTGQPPMGCFDWDPFVYLLGHDIDMVQQ
NVPAMLEAVFGIIDSGDAAKQLVEIPPLLIGSRELI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcactatctacgatctggcggaattatccggcgtctcggcgagcgcggtc
agcgcgattctcaacggcaactggaaaaagcgccgcatcagcgcgaagctggcggagaag
gttacccggattgccgaagagcagggctatgcgatcaaccgccaggccagcatgctgcgc
agcaaaaaatcccacgtgatcggcatgatcgtccctaaatatgataaccgctacttcgga
tcggtggcggaaagctttgaagagatggcgcgcgagcgtggcctgctgccgattattacc
tgtacccgtcgacgcccggagctggagattgaagccgtgaaggcgatgctctcatggcag
gtggactgggtggtggcgaccggggcgaccaacccggacaaaattaccgagctgtgccag
caggcgggcgtgcccaccgttaaccttgacctgccgggtaccattgcgccgtcggtgatt
tccgataactacgtcggggcgcgggcgctgaccgataaaatcctcgataacagcctgcgc
cggcacggcagcctcgcaccgctgaccttcgtcggcggacgcagcagcgaccacaacacc
cttgagcgcctgcgcggctttcacgacgcgcatcgggcgcgcggcctgagcgtaccggcg
gaaaatattatcgcccccggctactcgaaaggcaaagttgaggccagcatgcaggcccgc
ttcggcgcgccggatgagcatctgcagggcttcttcgtcaactccaccatctcgcttgaa
ggggtcgtccgctggctggcccagcggggactgaccggcaccgggcagccgccgatgggc
tgctttgactgggatcccttcgtctacctgctggggcacgatatcgacatggttcagcag
aacgtgccggcgatgctggaggcggtgttcggcattatcgattccggcgatgccgctaag
cagctggtcgaaatcccgccgctgctgatcggcagcagggagcttatctga
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