Klebsiella terrigena: NCTC13098_02366
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Entry
NCTC13098_02366 CDS
T06046
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
rtg
Klebsiella terrigena
Pathway
rtg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC13098_02366 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtg03400
]
NCTC13098_02366 (sbcB)
Enzymes [BR:
rtg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
NCTC13098_02366 (sbcB)
DNA repair and recombination proteins [BR:
rtg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC13098_02366 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13098_02366 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13098_02366 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
VDR26029
UniProt:
A0A3P8IV28
LinkDB
All DBs
Position
1:complement(1970354..1971778)
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AA seq
474 aa
AA seq
DB search
MQDSANQPGFLFHDYETFGTRPSLDRPAQFAAIRTDADLNVIGEPEVFYCKPADDYLPQP
QAVMITGITPQEAIAKGDNEAAFARRIHDLFTVPKTCIVGYNNVRFDDEVSRNIFYRNFY
DPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTVANGIEHSNAH
DAMADVYATIAMARLVKTRQPRLFDYLYTFRNKRKLATLIDVPQMTPLVHVSGMFGAARG
NTSWVAPLAWHPDNRNAVIMVDLAGDMSPLLELDADALRERLYTAKADLGDLPPVPVKLV
HLNKCPVLAKANTLRPEDAERLGIDRQRCLDNLQLLRGQPQVREKVVAIFAEAEPFVPSD
NVDTQLYNGFFSDADRAAMKIVLETDPRNLPALDITFADPRIERLLFNYRARNFPGSLDE
AEQQRWLEHRREVFTPEFLQAYADELQTLQQQYADNNEKLMLVKALWQYAQDIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagcgccaatcagcccggatttttattccacgactacgaaacctttggcacc
cgtccgtcccttgaccggccggcgcagtttgccgctatccgcaccgacgcggatcttaac
gtcatcggcgagcccgaggtgttctactgcaagccggctgacgactatctgccgcagccg
caggcggtgatgattaccggcatcacgccgcaggaagcgatcgccaaaggcgacaacgaa
gccgcctttgcccgccgcatccatgacctgttcacggtgccaaagacctgcattgtgggt
tacaacaacgtgcgtttcgatgacgaagtcagccgcaatatattctatcgcaacttctac
gatccctacgcctggagctggcagcacgataactcgcgctgggacctgctggacgtgatg
cgcgcctgctacgcgctgcgcccggaaggcatcaactggccggaaaacgacgacggcctg
cccagctttcgccttgagcatctgacggtggccaacggcatcgagcacagtaacgcccac
gatgcgatggccgacgtttatgccactatcgccatggccaggctggtcaaaacccggcag
ccgcgcctgttcgactacctttataccttccgcaacaagcgcaagctggcgacgctgatt
gacgtgccgcagatgacgccgctggtccacgtctccgggatgttcggcgccgcgcggggc
aacaccagctgggtggctccgctggcgtggcatccggataatcgcaatgcggtgattatg
gtcgaccttgccggcgatatgtcgccgctgctggagctggatgccgacgcgctgcgcgag
cgtctgtacacagccaaagccgacctcggcgacctgccgccggtaccggtcaagctggtc
cacctcaataaatgcccggtgctggccaaggccaatacgctgcgcccggaagatgcggag
cgtctgggcatcgaccgtcagcgctgcctcgataacctgcagctgctgcgcggccagccg
caggtgcgggaaaaagtggtggctattttcgccgaagcggagccgtttgtgccttccgat
aacgtcgatacccagctctacaacggcttcttcagcgatgccgatcgcgcggcgatgaag
attgtgctggagaccgatccgcgcaacctgccggcgctggacattaccttcgccgacccg
cgtatcgagcgcctgctgtttaactatcgcgcgcgaaacttcccgggcagccttgatgaa
gccgagcagcagcgctggttagagcatcgtcgggaggtgtttacgccggagtttttgcag
gcttatgccgatgagctgcagacgctgcagcagcagtatgctgacaataacgagaagctg
atgctggtgaaagcgctgtggcagtacgcgcaggatattgtttag
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