Raoultella terrigena: NCTC13098_02989
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Entry
NCTC13098_02989 CDS
T06046
Symbol
kdsA_1
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00541
Biosynthesis of various nucleotide sugars
rtg01100
Metabolic pathways
rtg01250
Biosynthesis of nucleotide sugars
Module
rtg_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC13098_02989 (kdsA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rtg01005
]
NCTC13098_02989 (kdsA_1)
Enzymes [BR:
rtg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NCTC13098_02989 (kdsA_1)
Lipopolysaccharide biosynthesis proteins [BR:
rtg01005
]
Lipid A
NCTC13098_02989 (kdsA_1)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PreP_C
Motif
Other DBs
NCBI-ProteinID:
VDR26638
UniProt:
A0A3P8JIK3
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All DBs
Position
1:2468439..2468927
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AA seq
162 aa
AA seq
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MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFQELKQAFGVKIITDVHEASQAQAVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFMKAATTR
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaagtggttagcattggtgatatcaacgtagcaaacgacctgcctttcgtc
ctgtttggcgggatgaacgtgctggaatcccgcgatctcgcgatgcgtatctgcgaacac
tatgtgacggtaacgcagaagctgggcattccttatgtgttcaaagcctcttttgataaa
gccaaccgttcttccatccactcctatcgcgggccgggtctggaagaagggatgaagatt
ttccaggagctgaagcaggctttcggcgtgaaaatcatcactgacgttcatgaagccagc
caggcgcaggccgtggccgacgtggttgacgtgattcagctgccggcattcctcgcccgc
cagaccgacctggttgaagccatggcgaaaaccggcgcggtgatcaacgttaagaaaccg
cagttcgtgagcccgggccagatgggcaatatcgtcgacaagtttatgaaggcggcaacg
accaggtaa
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