Raoultella terrigena: NCTC13098_05037
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Entry
NCTC13098_05037 CDS
T06046
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rtg
Raoultella terrigena
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtg03032
]
NCTC13098_05037 (ihfB)
03036 Chromosome and associated proteins [BR:
rtg03036
]
NCTC13098_05037 (ihfB)
03400 DNA repair and recombination proteins [BR:
rtg03400
]
NCTC13098_05037 (ihfB)
DNA replication proteins [BR:
rtg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC13098_05037 (ihfB)
Chromosome and associated proteins [BR:
rtg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCTC13098_05037 (ihfB)
DNA repair and recombination proteins [BR:
rtg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCTC13098_05037 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
VDR28652
UniProt:
A0A1V2BTT6
LinkDB
All DBs
Position
1:complement(4184707..4184994)
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AA seq
95 aa
AA seq
DB search
MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYEE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgatagaaagacttgccagccagcaatcccacattcctgcgaaa
gcggttgaagatgctgttaaagaaatgctggaacatatggcctcaacgcttgctcaaggt
gagcgcattgaaatccgcggtttcggcagcttctctttgcattaccgtgcacctcgcacc
gggcgtaacccgaaaactggcgataaagtcgagctggaaggcaagtacgttccgcacttt
aagcctgggaaagaattacgcgaccgcgccaatatttacgaagagtaa
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