Raoultella terrigena: NCTC13098_05290
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Entry
NCTC13098_05290 CDS
T06046
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00020
Citrate cycle (TCA cycle)
rtg00190
Oxidative phosphorylation
rtg00650
Butanoate metabolism
rtg00720
Other carbon fixation pathways
rtg01100
Metabolic pathways
rtg01110
Biosynthesis of secondary metabolites
rtg01120
Microbial metabolism in diverse environments
rtg01200
Carbon metabolism
Module
rtg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NCTC13098_05290 (sdhA)
00650 Butanoate metabolism
NCTC13098_05290 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NCTC13098_05290 (sdhA)
00720 Other carbon fixation pathways
NCTC13098_05290 (sdhA)
Enzymes [BR:
rtg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NCTC13098_05290 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
VDR28897
UniProt:
A0A1V2BT91
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All DBs
Position
1:complement(4401540..4403306)
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQSGQSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLEDGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNADGAIVGC
TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTRVSGQALTVNAQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGVHLQ
ESIAEQGELRDATEEEIDASLARLNRWNGNRNGEDPAEIRKALQECMQHNFSVFREGDAM
AKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH
SRFDFPERDDENWLCHSLYLPESEAMTRRSVNMQPKLRPAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcctgtcagagaatttgatgctgttgtgattggtgccggtggcgcaggtatg
cgcgcggcgctgcagatttcccagagcggccagtcctgtgcgctgctctccaaagtgttc
cctactcgttcccataccgtttccgcgcagggtggcatcaccgttgcgctcggtaatacc
catgaagataactgggaatggcacatgtacgacaccgttaaagggtcggactacattggt
gaccaggacgccatcgaatatatgtgcaaaaccggtccggaagcgattctcgaactggat
catatgggcctgccgttctcgcgcctcgaagatggcaccatttatcaacgtccgtttggc
ggccagtcgaaaaacttcggcggcgagcaggcggcacgtaccgcggcggcagctgaccgt
accggccacgccctgctgcatacgctgtatcagcaaaacctgaaaaaccacaccactatc
ttctccgaatggtacgcgctggatctggtgaaaaacgccgacggtgccatcgttggctgt
accgcgctgtgtattgaaaccggcgaagtggtgtacttcaaggcccgcgcaaccgtgctg
gccaccggtggtgcaggtcgtatttatcaatcaaccaccaacgcccacatcaataccggt
gatggcgttgggatggcgatccgcgccggcgtgccggtgcaggatatggaaatgtggcag
ttccacccaaccggtatcgccggggctggggttctggtcaccgaaggctgccgcggtgaa
ggcggctatttgctgaataaacacggcgagcgctttatggagcgctatgctcctaatgcg
aaagacctggcgggtcgtgacgtggtggcgcgttccatcatgatcgaaatccgtgaaggt
cgcggctgcgacggtccgtggggcccgcatgccaagctgaagcttgaccacctgggtaaa
gaagttctcgaatcccgcctgccgggtatcctcgaactgtcccgtacctttgcgcacgtt
gacccggtgaaagagccgattccggttatcccaacctgtcactacatgatgggcggtatt
ccgacccgcgtaagcggccaggcgctgaccgtgaacgcccagggcgaagatgtggttatt
cctgggctgttcgccgtcggtgaaatcgcctgcgtatcggtccacggcgctaaccgcctg
ggcggcaactcgctgcttgatctggtggtgttcggccgcgcggtcggcgtacatctgcag
gaatctatcgccgaacagggcgagcttcgggacgctacggaagaagagatcgacgcttcc
ctggcgcgtctcaaccgctggaacggcaaccgtaacggtgaagacccggccgagatccgc
aaagcgctgcaggagtgtatgcagcacaacttctcggtgttccgcgaaggtgatgcgatg
gcgaaagggcttgagcagctgaaggcgatccgcgagcgtctgaaaaatgcgcgcctggac
gatacctccagcgagttcaacacccagcgcgttgagtgcctggagctggataacctgatg
gaaactgcttacgccaccgcggtgtcggcaaacttccgtaccgaaagtcgtggcgcgcat
agccgcttcgacttcccggaacgtgacgatgaaaactggctgtgccattccctgtacctg
ccagagtcggaagcgatgacgcgtcgtagcgtcaacatgcaaccgaaactgcgcccggca
ttcccgccgaagattcgtacttattaa
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