Raoultella terrigena: NCTC13098_05987
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Entry
NCTC13098_05987 CDS
T06046
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00250
Alanine, aspartate and glutamate metabolism
rtg00310
Lysine degradation
rtg00350
Tyrosine metabolism
rtg00650
Butanoate metabolism
rtg00760
Nicotinate and nicotinamide metabolism
rtg01100
Metabolic pathways
rtg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NCTC13098_05987 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC13098_05987 (gabD)
00310 Lysine degradation
NCTC13098_05987 (gabD)
00350 Tyrosine metabolism
NCTC13098_05987 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NCTC13098_05987 (gabD)
Enzymes [BR:
rtg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NCTC13098_05987 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NCTC13098_05987 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NCTC13098_05987 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
VDR29577
UniProt:
A0A3P8K2T2
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Position
1:4988443..4989891
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AA seq
482 aa
AA seq
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MQLNDPTLFRQQAFIDGQWRDALSGEVITVTNPANDQRLGSVPKMGAEETHEAIDAANRA
LPAWRALTAKERATILRRWFDLIMANQDDLARVMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRVYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELARRAGIPDGVFSVVTGSAGAVGNALTSNPLVRKLSFTGSTEIGRQ
LMAQCAQDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQEG
VYDRFAEKLQQAVEKLRLGDGLQSGVTTGPLIDDKAVAKVQEHIADALAKGARIMTGGKV
HELGGNFFQPTILLDVPDSAKVAKEETFGPLAPLFRFKDEADVIRQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGLISNEVAPFGGVKASGLGREGSKYGIDDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaacgacccaactttgtttcgccagcaggcatttatcgacggccagtggcgc
gatgccctcagcggggaggtgattacggtcaccaacccggccaacgaccagcggctgggc
agcgtgccgaaaatgggcgccgaagagacccacgaggccattgacgccgccaaccgcgcg
ctcccggcctggcgggcgctaacggctaaagagcgggccacgatcctgcgccgctggttc
gatcttatcatggcgaaccaggacgacctcgcccgcgtaatgaccctggagcaggggaaa
ccgctggcggaagctaagggcgaaatcagctacgccgcctcgtttatcgaatggtttgcc
gaagaaggcaagcgcgtctacggcgacaccattcccggccatcaggcggataagcgcctg
atcgttatcaagcagccgattggcgtcaccgccgccatcacgccgtggaacttccctgcc
gctatgatcacccgcaaggccggcccggcgctggccgctggctgtaccatggtgctcaag
cccgccagccagacccccttctccgccctcgcgctggccgagctggcccggcgcgccggc
attcctgacggcgtattcagcgtggtgaccggatccgccggcgccgtcggcaacgcgctg
accagcaacccgctggtgcgcaagctgtcgtttaccggctcgacggaaatcggccgtcag
ctgatggcgcagtgtgcgcaggatattaagaaagtctccctcgagctcggcggcaacgcg
ccgtttattgtgttcgacgatgccgatctcgataaagcggttgaaggcgcgctggcctcc
aagttccgcaacgccgggcagacctgcgtttgcgccaatcgcctgtacgtgcaggagggc
gtttacgaccgctttgccgaaaagctgcagcaggcggtggaaaagctgcggctcggcgat
ggcctgcaaagcggcgtcaccaccggaccgctgattgatgacaaagcggtcgccaaggtg
caggagcatattgccgatgccctcgccaaaggcgcgcgcatcatgaccggcggcaaggtg
cacgagctgggcggtaacttcttccagccgacgatcctgctggacgttcccgatagcgcg
aaggttgccaaagaggagaccttcggcccgctggccccgctgttccgctttaaagatgag
gcggacgttatccgtcaggctaacgataccgaattcggcctggcggcctatttctatgcc
cgcgatctgagccgcgtcttccgcgttggcgaggcgctggagtacgggattgtcgggatc
aacaccggcctcatctctaatgaagtcgcgccttttggcggcgtcaaagcctcggggctc
ggccgagagggctcgaagtatggaatcgatgattacttagagatcaaatatatgtgcatt
ggtctgtag
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