Raoultella terrigena: NCTC13098_06636
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Entry
NCTC13098_06636 CDS
T06046
Symbol
treR
Name
(GenBank) Trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
rtg
Raoultella terrigena
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtg03000
]
NCTC13098_06636 (treR)
Transcription factors [BR:
rtg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NCTC13098_06636 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_IclR
HTH_3
HTH_7
MarR_2
Peripla_BP_4
AAA_18
HTH_Tnp_ISL3
SpoIIID
HTH_Crp_2
MarR
CENP-B_N
HHH
HTH_26
HTH_28
TrmB
Motif
Other DBs
NCBI-ProteinID:
VDR30200
UniProt:
A0A3P8M3I3
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All DBs
Position
1:5539210..5540157
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVNERTRERVEAVMQQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPALVGEHLRILARRHVD
GVVLFGFTGITEEMLTPWRETLVLLARDAPGFASVCYDDDGAVRMLMQRLYDRGHRHISF
LGVPHSDVTTGQRRHQAYLDFCQQHRLTPTAALPGLAMKQGYENVASVLGADTSALLCAT
DTLALGASKYLQEQRIDSLQIASVGSTPLMKFLHPEILTVDPGYAEAGRQAARQLIEQIA
GSANPRQIVIPAALI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgaccatcaaagatatcgcgcgcttaagcggcgtcgggaaatcgacg
gtatcgcgcgtgctcaacaatgaaagcggcgtcaacgagcgcacccgggagcgggtggaa
gcggttatgcagcagcacggcttctcgccctcccgctccgcgcgcgcgatgcgcggtcag
agcgataaggtggtggcgattatcgtcacccgtcttgactcgctgtcggaaaaccttgcc
gtgcagaccatgctgcccgctttttacgagcagggttacgatccgattatgatggagagc
cagttctccccggcgctggttggcgagcatctcaggatcctcgcccgccgccatgttgac
ggcgtggtgctgtttggctttaccggcattaccgaagagatgctcacgccgtggcgcgaa
accctggtgctgctggcccgcgacgcgccgggctttgcctcggtctgctacgatgacgac
ggggcggtgaggatgctgatgcagcgcctctacgatcgcggccatcgccatatcagcttc
ctcggggtgccgcacagcgacgtcaccaccggccagcgccgccatcaggcctacctcgac
ttctgccagcagcaccgactcacgcccactgccgcgctgccgggcctggcgatgaagcag
ggctatgaaaacgtcgccagcgtcctcggcgcagacaccagcgccctgctttgcgccacc
gataccctcgcccttggtgccagcaagtacctgcaggagcagcgcatcgacagcctgcag
atcgccagcgtcggcagcacgccgctgatgaagttcctgcacccggaaattctcaccgtc
gatccgggctacgccgaggccggacgccaggcggcgcggcagctgatcgaacagatcgcc
ggcagcgctaaccctcgtcaaatcgtcattcccgcagcgctgatttag
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