Raoultella terrigena: NCTC13098_06643
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Entry
NCTC13098_06643 CDS
T06046
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00230
Purine metabolism
rtg00240
Pyrimidine metabolism
rtg01100
Metabolic pathways
rtg01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NCTC13098_06643 (nrdD)
00240 Pyrimidine metabolism
NCTC13098_06643 (nrdD)
Enzymes [BR:
rtg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
NCTC13098_06643 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
VDR30207
UniProt:
A0A3P8K4G7
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All DBs
Position
1:5547927..5550065
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AA seq
712 aa
AA seq
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MTPHVMKRDGCKMPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSQQMQNRAQVDINE
IQTAVENQLMSGPWKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNSSLLNENANK
DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGEIHYHDLDYSPFFPMFNCMLIDL
KGMLTHGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVAESC
KKHRKIAEEWQIPNAEEYARSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQQSILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHRFGDANYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENEDGEQVHDGRNNLGVISLNLPRIALEA
RGDEAAFWKLLDSRLELARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVADIF
KNGRASISLGYIGIHETINALSGDQHMYDSDALREKGIAIVKRMRDAVEQWKEETGYGFS
LYSTPSENLCDRFCRLDTAEFGVISGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL
ASGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF
TCAKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcatgtgatgaaaagagatggctgcaaaatgccgtttaagtcagagcgcatt
aaagaagcaattctgcgtgcagctaaagcagcgggagtcgatgacgcagactattgcgcc
accgtcgcagaagtcgttagccagcaaatgcagaaccgggctcaggtcgatattaacgaa
atccagaccgccgttgagaaccagctgatgtccggtccgtggaagcagctggcgcgcgcc
tatattgaatatcgccacgatcgcgatatcgagcgtgaaaaacgcggccgcctgaaccag
gagattcgcggcctggtagagcaaaccaactcgtccctgcttaacgaaaacgccaacaaa
gacagtaaggtgatccccacccagcgcgacctgctggccgggattgtcgccaaacactac
gctcgccagcacctgctgccgcgcgacgtggtgcaggcgcacgagcgcggcgagatccac
tatcacgatctcgactactcgccgttcttcccgatgtttaactgcatgctgattgacctc
aagggcatgctgacccacggctttaaaatgggcaacgccgagatcgagccgccgaaatct
atctctaccgccacggcggttacggcgcagattatcgcccaggtcgccagccatatttac
ggcgggaccaccatcaaccgtatcgatgaagtgctggcgccgttcgtggccgagagctgc
aagaagcatcgcaaaatcgccgaagagtggcagatcccgaacgccgaagagtacgcccgc
tctcgcaccgagaaagagtgctacgacgccttccagtcgctggaatacgaagtgaatacc
ctgcacaccgccaacggccagacgccgttcgtcacctttggctttggcctcggcaccagc
tgggaatcgcgtctgattcagcaatcgattctgcgcaaccgaattgccggtctgggtaaa
aaccgcaaaaccgcggtgttcccgaagctggtcttcgccattcgcgacggcctgaaccac
cgcttcggcgacgccaactacgacatcaagcagctggcgctggagtgcgcaagcaagcgc
atgtatccggatatcctcaactacgatcaggtggtgaaggtcaccggctcgtttaaaacg
ccgatgggctgccgcagcttcctcggggtgtgggaaaacgaggacggcgagcaggttcac
gacggccgcaacaacctcggcgtcatcagcctcaacctgccgcggatcgcgctggaagcc
aggggcgacgaagccgccttctggaaactgctcgacagccgcctggagctggcgcgtaag
gccctgatgacgcgcattgcgcgcctggaaggggtgaaggcccgagtcgcaccgattctg
tatatggaaggcgcctgcggcgtacgcctgaaggcggacgacgacgtggcggatatcttt
aaaaacggccgcgcgtcgatttcgctgggctatatcggcattcacgagaccatcaacgcg
ctctccggcgaccagcatatgtacgatagcgacgcgctgcgcgagaagggtatcgccatc
gtcaagcgcatgcgcgacgccgtggagcagtggaaggaggagaccggctacggcttcagc
ctctacagcacgccgagtgaaaacctgtgcgatcgcttctgtcgcctcgataccgccgag
tttggcgtcatcagcggcgtgaccgataagggctactacaccaacagcttccacctcgac
gtcgagaagaaggtcaacccttacgataagatcgacttcgaagcgccctacccgccgctg
gccagcgggggcttcatttgctacggcgaatacccgaacattcagcacaacctgaaggcg
ctggaagacgtctgggactacagctaccagcacgtgccgtactacggaaccaacacgccc
atcgacgagtgctacgagtgcggctttaccggcgagttcgagtgcaccagcaaagggttt
acctgcgcgaaatgcggtaaccacgacgcggcccgcgtctcggtcacccgccgcgtgtgc
ggctatctcggcagcccggacgcccgtccgttcaacgccggcaagcaggaagaggtgaag
cgccgcgttaagcaccttggcaacgggcagatcggttaa
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