Raoultella terrigena: NCTC13098_06729
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Entry
NCTC13098_06729 CDS
T06046
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00020
Citrate cycle (TCA cycle)
rtg00190
Oxidative phosphorylation
rtg00620
Pyruvate metabolism
rtg00650
Butanoate metabolism
rtg00720
Other carbon fixation pathways
rtg01100
Metabolic pathways
rtg01110
Biosynthesis of secondary metabolites
rtg01120
Microbial metabolism in diverse environments
rtg01200
Carbon metabolism
rtg02020
Two-component system
Module
rtg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rtg_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NCTC13098_06729 (frdA)
00620 Pyruvate metabolism
NCTC13098_06729 (frdA)
00650 Butanoate metabolism
NCTC13098_06729 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NCTC13098_06729 (frdA)
00720 Other carbon fixation pathways
NCTC13098_06729 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC13098_06729 (frdA)
Enzymes [BR:
rtg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NCTC13098_06729 (frdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
GIDA
FAD_oxidored
DAO
FabD_helical_ins
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
VDR30290
UniProt:
A0A3P8M3L2
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All DBs
Position
1:5629652..5631442
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AA seq
596 aa
AA seq
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MQTFQADLAVIGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVTQDH
DSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWGCPWSRRPDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGQAHGLVAMNMMEGS
LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGIALSHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
KGNTIPTPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG
GIETDQSCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAIRRASEAKE
ANVSALDAQTADVEKRLKDLMNQEGNENWAKIRDEMGLSMEEGCGIYRTPELMQKTVDKL
AELQERFRHVRITDSSSVFNTDLLYTIELGHGLNVAECMAHSALARKESRGAHQRLDEGC
TERDDVNFLKHTLAFRDADGTTRLEYGDVKITTLPPAKRVYGAEAEAAEKKETTNG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacttttcaagccgatcttgccgtaattggcgctggcggagcgggtcttcgcgct
gcaatcgccgcagcgcaggctaatccaaatgccaaaatcgcactgatttcaaaagtctat
cctatgcgcagccacacggttgcggctgaaggtggctccgccgccgtgacgcaggatcat
gacagctttgagtaccattttcacgacaccgtcgccggcggcgactggctttgtgagcag
gatgtcgtcgactatttcgtccatcattgcccgacggaaatgacccagcttgaacagtgg
ggatgcccgtggagccgccgtccggacggaagcgtcaacgtccgccgcttcggcgggatg
aagatcgaacgcacgtggtttgccgcggataaaaccggcttccatatgctgcacaccctg
ttccagacctcccttcagttcccgcaaatccagcgtttcgacgaacatttcgtcctcgat
attctggtcgacgatggccaggcgcatggcctggtggcgatgaatatgatggaaggctcg
ctggtacaaatccgcgctaacgcggtggtgatggccaccggcggcgcaggacgcgtctat
cgctacaacaccaacggcggcatcgtcaccggcgatgggatgggcatcgcgctcagccac
ggcgttccgctgcgcgatatggagttcgtgcagtatcacccgaccggccttcccggctcc
ggtattctgatgacggaaggctgccgtggcgaaggcggtatcctggtcaacaaggacggc
taccgctacctgcaggattacggcatgggcccggaaacgccgctcggcgagccgaaaaac
aaatatatggagctcggcccgcgcgacaaggtctcccaggccttctggcacgaatggcgt
aaaggcaacaccattccaacgccgcgcggcgacgtggtttatctcgacctgcgccactta
ggtgagaaaaagctgctggagcgtctgccgtttatctgcgaactggcgaaggcctacgtc
ggcgttgatccggttaaagagcctattcccgtgcgcccaaccgcgcactacaccatgggc
ggcatcgaaaccgaccagagctgtgaaacccgcatcaaggggctgttcgccgtgggcgaa
tgctcgtcggtcggccttcacggcgccaaccgccttggctcaaactcgctggcagagctg
gtggtctttggccgcctcgccggcgagcaggccatcaggcgggcgtcggaggctaaagaa
gccaacgtgagcgcgctggatgcgcagactgccgacgtagaaaaacgcctgaaagacctt
atgaatcaggaaggtaacgagaactgggcgaagatccgcgacgagatgggcctgtcgatg
gaagaaggctgcgggatctaccgcacgccggagctgatgcagaaaaccgtcgataagctg
gccgagctgcaggagcgcttcaggcacgtacgcattaccgacagctccagcgtgttcaat
accgacctgctgtataccatcgagctgggccacggtctgaacgtggcggaatgtatggcc
cactctgcccttgcgcgtaaagagtcccgcggcgcgcaccagcgcctggatgagggctgc
accgagcgtgacgacgtcaatttcctcaagcatacgctcgcattccgcgatgccgatggc
accacgcgccttgagtatggcgatgtgaagatcaccactctgccgccggcaaaacgcgta
tacggcgcagaagcggaagcagccgagaagaaggagacgaccaatggctga
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