Raoultella terrigena: NCTC13098_06999
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Entry
NCTC13098_06999 CDS
T06046
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rtg
Raoultella terrigena
Pathway
rtg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13098_06999 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtg03019
]
NCTC13098_06999 (recQ)
03400 DNA repair and recombination proteins [BR:
rtg03400
]
NCTC13098_06999 (recQ)
Enzymes [BR:
rtg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13098_06999 (recQ)
Messenger RNA biogenesis [BR:
rtg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13098_06999 (recQ)
DNA repair and recombination proteins [BR:
rtg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13098_06999 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
DUF6972
Motif
Other DBs
NCBI-ProteinID:
VDR30540
UniProt:
A0A3P8M3T5
LinkDB
All DBs
Position
1:complement(5865287..5867113)
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AA seq
608 aa
AA seq
DB search
MAQAEVLNQTLLAKQVLQETFGYQQFRPGQETIIDTALEGRDCLVVMPTGGGKSLCYQVP
ALVLGGLTVVVSPLISLMKDQVDQLLANGVSAACLNSTQSREQQQEVMAGCRSGQVRLLY
IAPERLMLDNFLEHLSHWNLSMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMAL
TATADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGI
IYCNSRSKVEDTAARLQSRGVSAAAYHAGLEHQVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEACGNCDICLDPPKQYDALMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMAHDKLPVYGIGRDRSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGEVPLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQSPITAGEMLSVNGVGTRKLERFGKEFMALIR
AHIDGEEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattgaatcaaacgttgctggcaaagcaggttttacaggaaacc
ttcggctaccagcagttccgcccgggtcaggaaaccattatcgacacggcgctggaaggg
cgtgattgcctggtcgtgatgccaaccggcggcggtaaatcgctgtgctatcaggtgccg
gcgctggtgctgggcggcctgacggtggtggtatcgccgctgatctcgctgatgaaagat
caggtcgatcagctgttggcgaacggcgtgtcggcggcctgcctgaactcaacccagagc
cgcgagcagcagcaggaggtcatggcaggctgccgcagcggacaggttcgcctgctctat
atcgcccctgaacgcctgatgctggataatttcctcgagcatctcagccactggaatttg
tcgatgctggcggtggatgaggcgcactgtatttcccagtgggggcatgacttccgtccg
gaatacgccgccctggggcagctgcgtcagcggatgccgcaaatcccgtttatggcgctg
accgccaccgccgatgacaccacccgtcgcgatatcgtgcgcctgctggggctgaacgac
ccgctgatccaggtcagcagcttcgatcgccctaacatccgctatatgctgatggaaaaa
tttaagcccctggaccagctgatgcgctacgtgcaggaccagcggggcaagtcgggcatt
atttactgcaacagccgctcgaaagtagaagataccgccgcgcgcctgcaaagccgcggc
gtcagcgcggcggcctatcacgccgggctggagcatcaggtccgtgccgatgtgcaggag
aagttccagcgcgatgacctacaaatcgtggtggcgacggtggccttcggaatgggcatc
aataagccgaacgtccgctttgtggtgcactttgatattccccgtaacattgagtcctac
tatcaggaaaccggccgcgccgggcgcgatggcctgccggcggaggcaatgctgttttac
gatccggctgatatggcgtggctgcgccgctgccttgaggagaagcccgccgggccgctg
ctggatattgaacgccataagctgaacgccatgggggcctttgccgaggcgcagacctgc
cgccgcctggtgctgctgaactattttggcgaagggcgtcaggaggcgtgcggcaactgc
gatatctgcctcgacccgccgaagcagtacgatgcgttaatggatgcgcgtaaggcgctg
tcgacgatttatcgcgtcaaccagcggttcgggatgggctacgtcgtggaggttctgcgc
ggcgccaataaccagcgtattcgcgatatggcccacgataagctgccggtttacggtatt
ggccgcgatcggagccacgagcattgggtaagcgtcattcgccagctgatccacctcggg
ctggtgacgcagaatatcgcccagcattcggcgctgcagctcaccgaagccgctcgcccg
gtactgcgcggcgaggtcccgctgcagctggcggtaccgcgcatcgtggcgctgaagcca
aaagcgatgcaaaaatcattcggcggcaattacgatcgcaagctgtttgccaagctgcgc
aagctgcgtaaagccattgccgacgaagagaatatcccgccctatgtcgtctttaacgat
gcgacgctgatcgaaatggccgagcaatcgccgattaccgccggcgagatgcttagcgtc
aatggcgtcggtacgcgcaagcttgagcgcttcggcaaagagtttatggcgctgatccgc
gcgcatattgatggtgaagaggagtag
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