Raoultella terrigena: NCTC13098_07165
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Entry
NCTC13098_07165 CDS
T06046
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rtg
Raoultella terrigena
Pathway
rtg03030
DNA replication
rtg03410
Base excision repair
rtg03420
Nucleotide excision repair
rtg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13098_07165 (polA)
03410 Base excision repair
NCTC13098_07165 (polA)
03420 Nucleotide excision repair
NCTC13098_07165 (polA)
03440 Homologous recombination
NCTC13098_07165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtg03032
]
NCTC13098_07165 (polA)
03400 DNA repair and recombination proteins [BR:
rtg03400
]
NCTC13098_07165 (polA)
Enzymes [BR:
rtg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13098_07165 (polA)
DNA replication proteins [BR:
rtg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC13098_07165 (polA)
DNA repair and recombination proteins [BR:
rtg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC13098_07165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13098_07165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VDR30688
UniProt:
A0A3P8JUT0
LinkDB
All DBs
Position
1:complement(6012330..6015116)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAVV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLMAVPGVEADDVIGT
LARQAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEAEKIAGLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELDLSCEELLVLEPAADDLLTLFKKYEFKRWITDVESGKWMQAK
GSKPAAKPAQAAVAEEEVVEAAATLSAENYVTILDEETLTAWIEKLKKAPLFAFDTETDS
LDNISANMVGLSFAIEPGVAAYVPVAHDYLDAPDQIPRDRVLELLKPLLEDNSLLKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLQHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQQHEGPLQVFKNIEMPLVPVLSRV
ERNGVKIDPAVLHAHSQEIAKRLVELEQKAYEIAGEEFNLSSPKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPQDYLIVSADYSQIELRIMAHLSRD
NGLLTAFAEGKDIHRATAAEVFSLPLESVSSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RREAQKYMDLYFERYPGVLDYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDEWLLTEKPRVRMIMQVHDELVFEVHKDDLDSVAKKV
HELMENSTTLAVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatccctgaaaaccctctcatcctcgttgacggctcctcttacctttaccgg
gcgtatcacgcattcccgccgctgaccaacagcgcaggcgagccgaccggcgcaatgtac
ggcgtgctgaatatgctgcgaagcctgatcctacagtaccagcccacccatgccgtggtg
gtgtttgatgccaaagggaaaactttccgtgacgaactgtttgagcactacaaatcccac
cgtccgccgatgccagacgatctgcgtgcgcagattgagccgctgcacacgatggtgaaa
gcgatgggcctgccgctgatggcggtaccgggcgtggaggctgacgatgtgattggcacc
ctggcgcgtcaggccgaaaaagcgggtcgtccggtattgatcagtaccggcgataaggac
atggcccagctggtcactccgggtatcaccctgattaacaccatgaccaatacgatcctc
ggcccggatgaagtggtgacgaagtacggcgttccgccagagctgatcatcgatttcctc
gccctgatgggcgactcctcggataacattccaggcgttccgggggttggagagaaaacc
gctcaggccctgctgcagggattgggtggccttgatacgctgtatgccgaagcggaaaaa
atcgctggcctgagcttccgtggcgccaaaacaatggcggcgaagctcgagcagaataaa
gaggtggcgtacctctcctatcagctggcaaccattaaaacagacgtggagctggatctg
agctgcgaagagctgctggttctggaaccggcggcggacgatctgctgacgctgttcaaa
aagtatgaattcaagcgctggataaccgacgtggagtccggcaagtggatgcaggcaaaa
gggagcaagcctgcggcaaaaccggcgcaagcggcggtggctgaagaagaggttgttgaa
gctgcggcaacgctctctgccgaaaactacgtcaccattcttgatgaagagacgctaacg
gcgtggattgagaagctcaagaaagcgccgctgtttgctttcgatacggaaacggacagc
ctggataacatctcggccaacatggtcggcctgtcgttcgctatcgagcccggcgttgcg
gcctatgtgccggttgcgcatgattatctcgatgcgccggatcagatcccgcgcgatcgc
gtgcttgagctgctcaagccgctgctggaagataacagcctcctcaaagttgggcaaaac
ctgaagtacgaccgcgggattttggcgaactatggcattgagctccgcggcattgccttc
gatacgatgctggagtcctacatccttgatagcgtggcggggcgccatgacatggatagc
ctctccgatcgctggcttcagcataaaaccatcacctttgaagagattgccggcaaagga
aagaatcagcttacgtttaaccagattgcgttggaagaagcgggccgctatgcggctgaa
gatgccgacgtcactctgcagctgcacctgaagatgtggccgaagctgcagcagcacgaa
gggccgctgcaggtatttaaaaatatcgagatgccgctggtaccggtgctatcccgcgtt
gagcgcaacggggttaaaattgatcctgcggtgctgcatgcccattctcaggagatcgct
aagcgcctggttgagctggagcagaaggcctatgagatcgccggggaagagttcaatctc
tcctcaccgaagcagctgcaaacgattctgtttgaaaagcagggtattaaaccgctgaag
aaaaccccgggcggcgcgccatcgacttcggaagaggtgctggaagagctggcgctggac
tatccgctgccgaaggtgattcttgagtaccgcgggctggccaagctgaagtcgacgtat
accgataagctgccgctgatgattaaccccaaaaccggccgggtccatacctcataccat
caggccgttaccgccaccgggcgactctcttcaacggaccctaacctgcaaaatataccg
gtgcgtaacgaggaagggcgacgcattcgtcaggcgtttatcgcaccgcaggattatctc
atcgtctcggccgactactcgcagattgaactgcgcatcatggcccatttatctcgtgat
aatggcctgctgaccgcttttgctgaaggaaaagatatccaccgggcgacggcggcggag
gtctttagcctgccgctggaaagcgtcagcagcgagcagcgtcgtagcgctaaagcgatc
aactttggtttgatctacggcatgagcgcattcggcctcgcgcgccagctcaatattccg
cgcagagaagcgcaaaagtatatggatctctacttcgagcgctatccgggtgtgctggat
tatatggagcgcacccgcgcgcaggcgaaagagcagggatatgttgaaaccctggacggt
cgtcggctctatctcccggacatcaaatccagcaacggcgcacgtcgtgcgggcgctgag
cgagcggcaatcaacgcgccaatgcaggggacggcggcggatatcattaagcgggcaatg
attgccgttgatgagtggctgctgaccgagaagccgcgggtgcggatgattatgcaggtg
cacgatgaactggtctttgaagtgcataaagatgacctcgatagcgtggcgaaaaaggtc
catgaattaatggaaaacagcaccacgctggcggttccgctgctggtggaagtgggtagc
ggagaaaactgggatcaagcgcactaa
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