Raoultella terrigena: NCTC13098_07214
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Entry
NCTC13098_07214 CDS
T06046
Symbol
pelX
Name
(GenBank) Pectate disaccharide-lyase precursor
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00040
Pentose and glucuronate interconversions
rtg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NCTC13098_07214 (pelX)
Enzymes [BR:
rtg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
NCTC13098_07214 (pelX)
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Chondroitinas_B
PPDFL
Motif
Other DBs
NCBI-ProteinID:
VDR30731
UniProt:
A0A3P8KSU6
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Position
1:complement(6051946..6054129)
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AA seq
727 aa
AA seq
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MNKKIPLALALCSSIIALPLHAGEAHVWRGIAFGQSTDVNFSSNVLPEKIGVNDVTIAGK
KLTPQDTADLSAPVTIESRGGKIANSHDGLTFFYTMLPVSQNFILQATVTVDQFGPENGA
RPAAQEGAGLLVRDVIGLPRQQPLKVGYEEFPAASNMLMNAIVTQDKKDHSHIKLQAIGR
EGISQPWGNAGSSITRQSYKENIDLQQTPAFQLKLERTNDGFITSWAPTGSSEWVSKKVP
RSDTIAQQDKEHYYVGFFASRNAKITISNASLTTSAARTQASPPYIAKAWPVVMQIASGA
QSQSAEYILQARANYDGRFTVRQDEVIIGKDIAVKAGEMFTQPATLKDKNTFEVLFTPAT
SDKPVTQTLTVERSVGVEGRTLYVSAQGQANASGTADAPLTLSRGVELLPAGGTLILAAG
DYPQTQIPLSASGLKGQPKTLRADGKAVIHGLQLDASYWDIKGISVTDKSLRVQGSHNLI
ENVTAYRNDDTGIQISSPPDVGRPLWASYNRVVNSESFSNEDPGKINADGFAVKMRVGEG
NRLEGCYSYDNIDDGFDLFNKIEDGANGVVTIENSIARNNTSNGFKLGGEGQPVAHEVRN
SIAIGNHLDGFTDNFNPGSLVVVNNVAVDNQRFNYIFRASPYGKPETQGTFSDNISLRSQ
PGKYDDAVVGNIDDSNYFIHDGKSINAQGKSIKSDDYQTLALPDPLLRHADGRFNTGDFL
SRSQPRS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaatccctttggcattagccctttgtagctcaattatcgcattgccgctg
cacgctggcgaggctcatgtctggcgaggtatcgcttttggtcaatcaaccgacgttaat
ttctcctccaacgtcctgccggaaaaaatcggggtgaatgacgttacgatagcaggtaaa
aagctgacgccccaggatactgccgatctcagcgctcccgtcaccattgagagtcgggga
ggcaagatcgcgaattcgcatgacggtctgaccttcttttataccatgctgccggttagc
caaaactttatcctgcaggcgacggtcacggtggatcagttcggcccggagaacggcgcc
cgcccggcagcacaggaaggcgccgggctgctggtgcgtgatgttatcggtctgccgcgc
cagcagcctttaaaggtgggctatgaagagtttccggcagcatcgaatatgctcatgaac
gcgatcgtgacccaggataagaaagatcattcgcatataaaactgcaggcgatcggccga
gaagggatttcccagccctggggcaatgccggttcttctattaccaggcagagctacaaa
gagaatatcgatctccagcaaacgccagcctttcagctcaagctggaacgcactaacgac
ggtttcatcacctcatgggcgccgacgggcagcagcgaatgggtaagcaagaaggttccc
cgcagcgacacgatcgcccagcaggataaagagcattactacgtcggctttttcgcctcg
cgtaatgccaaaatcaccatcagcaacgcctcgctgaccacttctgcagccaggacgcag
gcttctccgccctatatcgcgaaagcctggccggttgtgatgcagattgcctctggcgcc
caaagccagagcgcggagtatattctgcaggcgcgggctaactatgacgggcgcttcacc
gtccgccaggacgaagtcatcatcggcaaggacatcgccgtcaaagccggggagatgttt
acgcaacccgccacgctcaaagacaagaacaccttcgaggttctgtttacgccggccacc
agcgacaagccggtgacgcaaacgctgacggttgaacgcagcgtcggcgtcgaaggccgt
accctctacgtttctgcgcaagggcaggctaacgccagcggaacggctgacgctccgctc
actctctcccgcggcgtggaactactgccggctggcggcacgcttatcttagccgcagga
gactatccgcaaacgcagatcccgctcagcgccagcgggctcaaagggcaacctaagacg
ctgcgggccgacggaaaggcggttattcacggcctgcagctcgacgccagctactgggac
atcaaggggatctccgtcaccgataaaagcctgcgcgtgcagggcagccataatctgatt
gagaacgtcaccgcttatcgcaacgacgataccgggattcaaatttcctctccgccggac
gtggggcgcccgctgtgggccagctacaaccgggtggtcaactccgaatcgttcagcaat
gaagatccgggcaagatcaacgccgatgggtttgcggtcaaaatgcgggtgggtgaggga
aaccggctcgaagggtgctactcctacgataatatcgacgacggatttgacctgttcaac
aagattgaagatggtgctaacggcgttgtgacgatcgagaactcaattgcccgtaataac
accagcaatggttttaagctgggtggggaagggcagccggtggcgcatgaggtgcgcaac
agcattgcgataggtaatcacctggacggttttactgataacttcaaccccggcagtctg
gtggtggtcaacaacgtggcggtggataatcagcgttttaactacatcttccgcgccagc
ccgtacggtaaacccgagactcagggcacgtttagcgacaatatctccctgcgtagccag
cctggaaaatacgatgatgccgtggtcggcaatatcgacgacagcaactattttatccac
gacggtaagagcatcaacgcccagggaaagagcattaagagcgacgactatcaaacgctg
gcgctgccggacccgctgctgcgccatgcggatggccgtttcaataccggcgatttcctc
agccgcagccagcctcgttcctga
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