Rhodanobacter thiooxydans: LRK53_00705
Help
Entry
LRK53_00705 CDS
T08065
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRK53_00705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rth02000
]
LRK53_00705
Transporters [BR:
rth02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LRK53_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Sterol-sensing
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
UJJ54960
LinkDB
All DBs
Position
163449..166616
Genome browser
AA seq
1055 aa
AA seq
DB search
MNIFAPLIRRPVGTSLLALGLMLAGLWAYLLLGVAALPSLDFPGVYVVASQPGASAQTMA
NTVLAPLERHLGRIPGVDEMYGNASEGQASVMVRFTFDRTADSAARDVQAAINAAAVDLP
TGMPSLPQYFKFDTSQIPILFLTLTSTGLPQDQLFDLADTMLKPAVAQIDGVAQVQVFGG
TPHAVRIELDNGALAAKGLTTNDVANALRAANVTSPQGTLSDGHTQMTVSASDSLQTPAE
FARLLISVRNGTPVRLSDVAKVYSGQQDEYQAAWFNDARAVGLQISKRPEANAVATVEAI
RARLPQLRASLPSSVTMTPVFDLTQTTKSALHEVQVALLISIAMVVLVMLVFLRRLRPTL
IATLSVPLSLAGAFVVMWTLGYTLNTLSLVALVLCIGFVVDDAIVVIENIVRHMERGEPP
MEAALAGVREIGFTVVSITLSLVAVFAPLLFGNNILIMLLREFSVTLTAAVVISALVSLT
LTPALCAWLLSHEPEHTRQPGRIEQAVERFDRRLLHIYERALDWAMHHRRIMRWQPLTLL
ILTFVLGFAVAKTAGGTFMPDEDTGQLQVDISADANISPAELTARALAVAKIMQADPAVL
DQLTMLGRDGGGGGAVGNNAQMFVDLKPRGSGPGERREGIKQVVERLSKQYDKLANVKVS
VSAAQFLGGGGSGDKGGQYEFQLVSTNGGDLQPWALRMVRQLRAMKEFRDVSSNFDQVGK
QQLLKIDREAAARLHVGVGTIDSALYNAFGQRQVSQIYSDINQYAVVLSTGAAERVSPES
LLDVRVRNEQGRMIPLSALATIAPNLSPLRIRHHNQLEAATISYNLAKDVTQDVGVKLVE
QAAYAARLPAGMRVDFTGANQRLKQAQSNGMVLLLGSILAMYIVLGILYESLGHPLTILS
TLPAAGAGAFLAMLVTQTQISLMAIIAVLMLIGIVKKNAILMVDFALVAERERGLPAPEA
IREAALVRFRPITMTTLVAMGAALPLAIGFGIGSEMRQPLGIAIVGGLLVSQLLTLLSTP
AIYLWNHDRKIRKAARRERKAEKKRLKALGGTQAA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctttgccccgctgatccgccgtccggtcggcacctcgctgctcgcgctcggc
ctgatgctggccggcttgtgggcttacctgctgctcggcgtggcggcgctgccgtcgctg
gatttccccggcgtctacgtggtggccagccagcccggcgccagcgcgcagaccatggcg
aacaccgtgctggcgccgctggagcggcacctggggcgcattcccggcgtcgacgagatg
tacggcaacgccagcgagggccaggcctcggtgatggtgcgcttcaccttcgaccgcacc
gccgacagcgccgcgcgcgacgtgcaggcggcgatcaatgcggccgcggtcgacctgccg
accggcatgccgtcgctgccgcagtacttcaagttcgacacctcgcagatcccgatcctg
ttcctcaccttgacctcgaccggcctgccacaggaccagctgttcgatcttgccgacacc
atgctgaagccggcggtggcgcagatcgacggcgtggcccaggtgcaggtgttcggcggc
accccgcatgcggtgcggatcgagctggacaacggcgcgctggcggccaagggcctcacc
accaacgacgtggccaacgcgctgcgcgcggccaacgtcacctcgccgcagggcacgctg
agcgacggccatacgcagatgacggtgagcgccagcgacagcctgcagacgccagccgag
tttgcccgcctgctgatttcggtgaggaacggcacgccggtgcggctgtccgacgtggcg
aaggtctacagcggccagcaggacgaataccaggcggcctggttcaacgacgcgcgcgcg
gtcggcctgcagatcagcaagcggccggaggcgaacgcggtggccacggtggaggcgatc
cgcgcgcgcctgccgcagctgcgcgcctcgctgccgtccagcgtgacgatgacgccggtg
ttcgatctcacccagaccaccaagtcggcgctgcacgaggtgcaggtggcgctgctgatc
tcgatcgccatggtggtgctggtgatgctggtgttcctgcgccggctgcggcccacgctg
atcgccacactcagcgtgccgctgtcgctggccggcgcattcgtggtgatgtggacgctg
ggctacacgctcaataccttgtcgctggtggcgctggtgctgtgcatcggcttcgtggtg
gacgacgccatcgtggtgatcgagaacatcgtgcgccacatggagcgcggcgagccaccg
atggaggccgcgctggccggcgtgcgcgaaatcggcttcaccgtggtctcgatcaccttg
tcgctggtggcggtgttcgcgccgctgctgttcggcaacaacatactgatcatgctgctg
cgcgagttctcggtgacgctgaccgccgcggtggtgatctcggcgctggtctcgctcacg
ctcaccccggcgttgtgcgcctggctgctgagccacgagccggagcacaccaggcagccc
gggcgcatcgagcaggcggtggaacgcttcgaccgccggctgctgcacatctacgagcgt
gcgctggactgggccatgcaccatcgccggatcatgcgctggcaaccgttgaccctgctg
atcctgaccttcgtgctcggcttcgcggtggccaagaccgccggcggcaccttcatgccc
gacgaggacaccggccagctgcaggtggacatcagcgccgacgccaacatctcgccggcc
gagctgaccgcgcgcgcgctggcggtggccaagatcatgcaggccgatccggccgtgctc
gaccagctgaccatgcttggccgcgacggcggtggtggcggcgcggtgggcaacaacgcg
cagatgtttgtcgacctgaaaccgcgcggcagcgggccgggcgagcgccgcgagggcatc
aagcaggtggtcgagcggttgtccaagcagtacgacaagctggccaacgtgaaggtctcg
gtgagcgccgcgcagttcctcggcggcggcggcagcggcgacaagggcgggcagtacgaa
ttccagctggtcagcaccaacggcggcgacctgcagccgtgggcgctgaggatggtgcgg
cagctgcgcgcgatgaaggagttccgcgacgtcagcagcaacttcgaccaggtcggcaaa
cagcagctgctgaagatcgaccgcgaggcggccgcgcgcctgcacgtgggcgtcggcacc
atcgactcggcgctgtacaacgcgttcggccagcgccaggtgtcgcagatctactccgac
atcaaccagtacgcggtggtgctgagcaccggcgcggccgagcgggtgagcccggagtcg
cttctcgacgtgcgcgtgcgcaacgagcagggacggatgatcccgctgtccgcgctggcg
accatcgcgccgaacctgagtccgctgcgcatacgccaccacaaccagctggaagcagcc
acgatcagctacaacctggccaaggacgtcacccaggacgtgggcgtgaagctggtcgag
caggccgcctacgccgcgcgcctgccggccggcatgcgggtggatttcaccggcgccaac
cagcgcctgaagcaggcccagtccaacggcatggtgctgctgctcggctcgatcctggcc
atgtacatcgtgctgggcattctttatgaaagcctcggccatccgctgaccatcctctcc
accctgccggccgccggcgccggcgcgttcctggcgatgctggtgacgcagacgcagatc
tcgctgatggcgatcatcgcggtgctgatgctgatcggcatcgtcaagaagaacgcgatc
ctgatggtcgacttcgccctggtggccgaacgcgaacgcggcttgcccgcgccggaagcg
atccgcgaggcggcgctggtgcgcttccgcccgatcaccatgaccaccctggtggcgatg
ggcgcggcgctgccgctggcgatcggcttcggcatcggctcggaaatgcgccagccgctc
ggtatcgccatcgtcggcggcctgctggtgtcgcagctgctgaccctgctgagcacgcct
gcgatctacctgtggaaccacgaccgcaagatccgcaaggcggcgcgccgcgaacgcaag
gcggagaagaagcggctcaaggcgctgggcgggacccaggcggcgtga
DBGET
integrated database retrieval system
