Rhodanobacter thiooxydans: LRK53_01650
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Entry
LRK53_01650 CDS
T08065
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRK53_01650 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rth03019
]
LRK53_01650 (groL)
03110 Chaperones and folding catalysts [BR:
rth03110
]
LRK53_01650 (groL)
03029 Mitochondrial biogenesis [BR:
rth03029
]
LRK53_01650 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rth04147
]
LRK53_01650 (groL)
Enzymes [BR:
rth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LRK53_01650 (groL)
Messenger RNA biogenesis [BR:
rth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LRK53_01650 (groL)
Chaperones and folding catalysts [BR:
rth03110
]
Heat shock proteins
HSP60 / Chaperonin
LRK53_01650 (groL)
Mitochondrial biogenesis [BR:
rth03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LRK53_01650 (groL)
Exosome [BR:
rth04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LRK53_01650 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LRK53_01650 (groL)
Exosomal proteins of breast cancer cells
LRK53_01650 (groL)
Exosomal proteins of colorectal cancer cells
LRK53_01650 (groL)
Exosomal proteins of bladder cancer cells
LRK53_01650 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UJJ55137
LinkDB
All DBs
Position
388288..389937
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVRFGEDARSRMLKGVNTLANAVKVTLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKYENLGAQIVKEAASKTSDVAGDGTTTATVLAQAFIQEGLKAVAAGMNPMDLKRGI
DKAVAAAVGELKKLSNPTANDKEIAQVGTISANSDTNIGDIIATAMKKVGKEGVITVEEG
SGLDNELDVVEGMQFDRGYLSPYFINNQQSQQVELDDPYILIHDKKISNVRELLPVLEAV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVAAVKAPGFGDRRKAILEDIAILTNGQV
VSEEVGLSLEKTTIGDLGRAKRIVITKENTTIIDGAGEAEKIQSRIKQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALKAVEGLKGDNTDQNLGIAITRRALEAPLRAIVANAGEEPSVVLNKVKEGKGNYGYNA
ASGEFGDMVEMGILDPTKVTRTALQHAASVAGLAITTEAIVAELPKKEEHNHGAGGMGGG
MGGMGGMDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaagtccgtttcggcgaagacgcccgctcgcgcatgctcaagggcgtg
aacacgctcgccaatgccgtcaaggtcacgctcggcccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgcacccacgatcaccaaggacggcgtgtccgtcgccaaggagatc
gagctggccgacaagtacgagaacctcggcgcgcagatcgtcaaggaagccgcctccaag
acctccgacgtcgccggtgacggcactaccaccgccaccgtgctggcgcaggcgttcatc
caggaaggcctcaaggccgtcgccgcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtcgcggccgccgtcggcgagctgaagaagctctccaacccgaccgcgaac
gacaaggaaatcgcccaggtcggcaccatctcggccaactccgacaccaacatcggcgac
atcatcgccaccgcgatgaagaaggtcggcaaggaaggcgtgatcaccgtcgaggagggc
tcgggcctggacaacgagctggacgtggtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccagcagagccagcaggtcgagctggacgacccgtacatc
ctgatccacgacaagaagatctccaacgtgcgcgagctgctgcccgtgctggaagccgtc
gccaaggccggcaagccgctgctgatcgtggccgaggaagtcgagggcgaggcactggcc
acgctggtggtcaacaccatccgcggcatcgtcaaggtcgccgccgtcaaggcgccgggc
ttcggtgaccgtcgcaaggcgatcctggaagatatcgccatcctcaccaacggccaggtc
gtgtccgaagaagtgggcctgtcgctggagaagaccaccatcggcgatctgggccgcgcc
aagcgcatcgtgatcaccaaggaaaacaccaccatcatcgatggtgccggcgaggcggag
aagatccagtcgcgcatcaagcagatcaaggcgcagatcgaggagacctcctccgactac
gaccgtgagaagctgcaggaacgcgtggccaagctggccggtggcgtggccgtgatcaag
gtcggtgccgcgacggaagtcgagatgaaggaaaagaaggcccgcgtcgaagacgccctg
catgcgactcgtgcagccgtggaagagggtgtggtgcccggcggcggcgttgcgctgatc
cgtgcgctgaaggcagtcgaaggcctcaagggcgacaacaccgaccagaacctgggcatc
gcgatcacccgccgcgcgctggaagcgccgctgcgcgcgatcgtcgccaacgccggcgaa
gagccgagcgtggtgctgaacaaggtgaaggaaggcaagggcaactacggctacaacgcc
gccagcggcgagttcggcgatatggtcgagatgggcatcctggatccgaccaaggtgacc
cgcacggcgctgcagcacgccgcgtcggtcgccggcctggcgatcaccaccgaggcgatc
gtcgccgaactgccgaagaaggaagagcacaaccacggcgccggcggcatgggcggcggc
atgggcggcatgggcggcatggatttctga
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