Rhodanobacter thiooxydans: LRK53_01980
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Entry
LRK53_01980 CDS
T08065
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rth03400
]
LRK53_01980
DNA repair and recombination proteins [BR:
rth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LRK53_01980
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
UJJ55195
LinkDB
All DBs
Position
458338..458739
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AA seq
133 aa
AA seq
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MAKVRQKGTAPEIAMRHQLHRIGLRYRVDYEVLKKPRRVADLAFPRLKIAVFIDGCFWHG
CPEHASWPKQNAEFWRQKIEANRLRDLDTNERLRNEGWKVLRFWEHESPAIAAEAVAEAV
ASNRLERSISSAS
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtgcggcagaagggtacggctcccgagatcgcgatgcggcaccagctgcat
cgaatcgggttgcgctacagggtggattacgaggttttgaagaagcctcgccgtgtggct
gacctggctttccctcggctaaagatcgcggttttcatcgacggatgcttctggcatggc
tgtcctgagcatgcttcgtggccgaagcagaacgcagagttctggcggcaaaagatcgag
gcgaatcgactcagggatctggacacgaacgaacggcttcgcaacgagggatggaaagta
ttgcgattctgggagcacgagtctccggccatagcagcagaggccgtggctgaagcggtc
gcctcgaataggctggagcgctctatctcatcagccagttag
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