Rhodanobacter thiooxydans: LRK53_02445
Help
Entry
LRK53_02445 CDS
T08065
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rth03000
]
LRK53_02445
Transcription factors [BR:
rth03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LRK53_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_31
TetR_N
Motif
Other DBs
NCBI-ProteinID:
UJJ55284
LinkDB
All DBs
Position
complement(562735..563763)
Genome browser
AA seq
342 aa
AA seq
DB search
MSAATIKDVAREAKVSVASVSRALNGGGGVTAETSQRIHEAAERLHYVPHAAARMLITRR
TNTVGALLPDLHGEFFSELIRGIDLAARARGLHLLVSSSHDGAEDAATALRAMQGRVDGL
LILSNHVDAAFLRSNLPTGLPAVLLNSAVKSPSYGVLNIDNYGGAYAMVQHLLDAGHAGV
TFIAGPADNFDAQQRELGYRAAMAKHAPHAAPDVLPGDFSEEAGYRAGRQLLARTPRPHA
VFAANDMMAVGCLSAFKEAGVDVPRDTALAGFDDIPIARYVTPSLCTVRVRIADLGRSAL
EQLAAQLEDPRHATPSSHTLACEIVTRASCGGGRPAASQDAS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagccactatcaaagatgtagcgcgcgaggccaaggtttccgtggcctcggtg
tcgcgtgcactgaatgggggcggcggagtgactgccgagaccagccagcgcatccatgaa
gccgcggagcgtctgcactacgtgccgcatgccgcggcgcgcatgctgatcacccgccgc
accaacacggtcggcgcgctgctgccggacctgcatggcgagttcttttccgagctgatc
cgcggcatcgacctggccgcccgggcgcgcggcctgcacctgctggtgtccagctctcac
gatggggccgaggacgccgctaccgcgttgcgcgccatgcagggccgcgtcgatggcctg
ctgatcctgtccaaccacgtcgacgccgccttcctgcgcagcaacctgcccaccggcttg
ccggccgtgctgctcaacagtgccgtgaagagcccgtcgtacggcgtgctcaacatcgac
aactacggcggtgcctacgcgatggtgcagcacctgctcgacgccggccacgccggggtc
accttcatcgccggcccggccgacaatttcgacgcgcagcagcgcgaactcggctaccgc
gccgcgatggccaaacacgcgccgcacgcggcgccggacgtattgcccggcgacttcagc
gaagaggccggctaccgcgccgggcgccagctgctggcacgaacgccgcggccgcatgcc
gtgttcgccgccaacgacatgatggcggtcggctgcctgtccgcgttcaaggaggccggt
gtggacgtgccgcgcgataccgcgctggccggcttcgacgacatcccgattgcgcgctac
gtcaccccgtcgctttgcacggtgcgcgtacgcatcgccgacctgggccgcagcgcgctc
gaacaactggcggcgcagctggaggaccccaggcacgccacgccatccagtcacacgctc
gcctgcgagatcgtcacccgtgccagctgcggcggcgggcgacccgcggcgtcccaagac
gcttcatag
DBGET
integrated database retrieval system
