Rhodanobacter thiooxydans: LRK53_02905
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Entry
LRK53_02905 CDS
T08065
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rth03009
]
LRK53_02905 (rsmB)
Enzymes [BR:
rth01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LRK53_02905 (rsmB)
Ribosome biogenesis [BR:
rth03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LRK53_02905 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltr_RsmF_N
UCP010056
Motif
Other DBs
NCBI-ProteinID:
UJJ55367
LinkDB
All DBs
Position
complement(672110..673411)
Genome browser
AA seq
433 aa
AA seq
DB search
MKADTRALAARGLAEIALRGASLREVMERSAPRLPDPRDRALLMALLSEGARWWLRFDPA
VDDLLEKSLRHKDPAVHALLVLGLVQLEILELQDYAAVAATVEAVRTLKRPQLAGLVNAV
LRRWQRERESRLAKLDARPQTRHAHPAWLATALERDWPQQAEAVMAADNNEPPLMLRINR
RRSERETLIARLQAAGYAATAHPWLADALVLPHSSDVTRLPGFDDGLFAVQDGAAQVAAD
LADLHDGLRVLDACAAPGGKACHLLERADIDLTALEFDASRAERIRQNLMRLRLDAKIVT
GDAGAPKGWWNGRPFERILLDAPCSASGVLRRRPDVRLHRRESDIAAMQAQQRRLLAALW
PLLAPGGRLLYVTCSVLRAENEAIVGKLLAAQADAQAVPFTLPVGQPAAVGWQILPGDGD
LDGMYYAVLQKSR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgacacccgcgcactggccgccagggggcttgccgagatcgccctgcgcggc
gcctcgctgcgcgaggtgatggagcgctccgcgccgcggctgcccgacccgcgcgaccgc
gccctgctgatggccctgctcagcgaaggcgcgcgctggtggctgcgtttcgaccccgcg
gtcgacgacctgctggagaaatccctgcgccacaaggacccagccgtgcacgcgctgctg
gtgctgggtctggtccagctggagatcctcgaactgcaggactacgccgcggtggccgcc
acggtcgaggcggtgcgtacgctgaagcgaccgcagctggccggcctggtcaacgccgtg
ctgcggcgctggcagcgcgagcgcgaaagccggctggcgaaactcgacgcccggccgcag
acccgccacgcccatccggcctggctggccaccgcgcttgagcgcgactggccgcagcag
gccgaggcggtaatggccgccgacaacaacgagccgccgctgatgttgcggatcaaccgc
cggcgcagcgagcgcgaaacgctgatcgcccgactgcaggccgccggttacgccgcgact
gcgcatccctggctagccgatgcgctggtgctgccgcacagcagcgacgtcacccgtctg
cccggtttcgacgacggcctgttcgcggtgcaggatggcgccgcccaagtcgccgccgac
ctcgccgacctgcacgacggcctgcgcgtgctcgacgcctgcgccgcgcccggcggcaag
gcctgccacctgctcgaacgcgctgacatcgacctgaccgcactggaattcgacgcgtcg
cgcgccgaacgcatccgtcagaatctgatgcgcctgcgcctggacgcgaagatcgtgacc
ggcgatgccggcgcgccaaagggctggtggaacggccggccgttcgagcgcatcctgctc
gacgcgccgtgctcggccagcggcgtgctgcgccggcggccggacgtgcggttgcaccgg
cgcgagagcgacatcgctgcgatgcaggcgcagcagcgccgtctcctcgccgcgctgtgg
ccgctgctggcgccgggcgggcggctgctgtacgtcacctgctcggtgctgcgcgcggag
aacgaggcgattgtcggcaaactgctggccgcgcaagccgatgcgcaggccgtgccgttc
accctgccggtgggtcaacctgccgccgtcggctggcagatcctgcccggcgacggcgac
ctcgacggcatgtactacgccgtgctgcagaagtcccgctag
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