Rhodanobacter thiooxydans: LRK53_03350
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Entry
LRK53_03350 CDS
T08065
Name
(GenBank) TonB-dependent receptor
Organism
rth
Rhodanobacter thiooxydans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
Plug
SdrD_B
CarbopepD_reg_2
Invasin_D3
bMG3
Big_1
Dioxygenase_C
Motif
Other DBs
NCBI-ProteinID:
UJJ55448
LinkDB
All DBs
Position
complement(791614..794859)
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AA seq
1081 aa
AA seq
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MASMIRVRTLPLAVASLLAISPVFAQNITTSGAIGRVLDAQGKPVADATVTIVHVPSGTT
KAVSTDADGRYAAQGLRAGGPYTITASRPGEAGAEQDNVYLQLGQPSAINLALGGGSESA
RTLGAVTVSASTLAQTFTSENKGLSTNISQRQLQATPQGNRSIDDVVRLDPRVSVTDQGT
GAISAAGMNNRYNNIAVDGVTQGDPFGLNANGLPYQKSPISPETIAEYNISTANYDVVSD
VVGADVNAVTKSGTNDFHGAVYYSYRNANHLVGDAGWLPGGNPGYHYKGYRKDATYGFNV
GGPIVKDKLFFFVSAEHEKTTGIGADSANGLDDSLGNGPSTSNKVSPGDLQKIIDTAKQL
GLTPGGFGGPTGLTYDDKRYLGKIDWNISNNHRASFTYQRTKEMLPAVGGNSPSSVGLTS
YTYTKAITTDNYVAHVFDDWTDNFSTEAKVGYQKYVQDTTAPFQQPAVNVNLSPTGKGPS
VNLGEERYRHYNHIDTKKTSVFLAGTYVLGDHAVKGGIDYQRNKINNLFGQAEFGVYTFW
GLTNFAAGNYNKYELYHPAPGYALNDIAGKWTYSQYSPFLQDTWQVNDALSVQYGVRVDI
PHTSDKPVYNAAFAQAFGFANNYTVGSSNRIVEPRLSFNYLFDSSYKTQLRGGVGLFQTN
PPTVWMTNPFQNNGVTLRNYTSFNPASAPFSPDPLHQNIPAGGGAGSIDTIDPNFRLPSV
WKMSLALDRELPWWGMLASAEYQHIKVRDGILYEAVNYGDPTGTLPDGRLQFWKTPGEAP
TSKDALANQNRAFSTASTLLTNTHRGKSDSLTLALAKPFSDSWSGNVSLTFNHATDVDPG
TDTIAYNGYQRVARLNPNSNLLATSNYNVAKVLKASLTWQHAFFGDYQTQVSAFYSGHTG
LPYTWVFQNDANGDSVSGWDPAYIPSANDPKVAYAPGTSQQVIDQFQAFLASEKYLKDHR
GQIAGRNGTRTAWVNELDMSFSQEVPGIFKGNKGELRLDVYNMLNLLNKGWGQQRNTGIY
PTRTLASYAGVNAQGQYVYTLPTDKSGNYQPQQLQTYDGGFYDPSRVVSRWSAMLTLRYK
F
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatgatccgcgtccgcacgcttccgctcgccgtcgcctcgctgctggcgatc
tctcccgtcttcgcgcagaacatcaccacctccggcgccatcggccgcgtgctcgatgcg
cagggcaagccggtggccgacgccaccgtgaccatcgtgcacgtgccttcgggcaccacc
aaggcagtgagcaccgacgccgacggccgctatgcggcacagggcctgcgcgccggcggc
ccgtatacgattaccgcgtcgaggccgggcgaggcgggcgccgagcaggacaacgtctac
ctgcagctgggccagccctccgcgatcaacctggcgctgggcggcggcagcgaatcggcg
cgcacgctgggtgcggtgacggtgagcgcctcgacgctggcgcagaccttcacgtccgag
aacaagggtctctccaccaacatctcgcagcgccagctgcaggccaccccgcagggcaac
cgctcgatcgacgacgtggtgcggctggacccacgcgtgagcgtgaccgaccagggcacc
ggcgcgatctccgccgccggcatgaacaaccgctacaacaacatcgcggtggacggcgtg
acccagggtgatccgttcggcctgaacgcgaacggcctgccctaccagaaatcgccgatc
tcgccggagaccatcgccgagtacaacatctccacggcgaactatgacgtcgtctccgac
gtggtcggtgccgacgtcaacgcggtgaccaagtccggcaccaacgacttccacggcgcg
gtctactacagctaccgcaacgccaaccacctggtgggcgatgccggctggctgcccggc
ggcaaccccggctaccactacaagggctaccggaaggacgccacctacggcttcaacgtg
ggcggcccgatcgtcaaggacaagctgttcttcttcgtctccgccgagcatgagaagacc
accggcatcggcgccgattcggccaacggcctggacgactcgctgggcaacggcccgtcc
accagcaacaaggtgtcgccgggcgacctgcagaagatcatcgacacggccaaacagctg
ggcctcacgcccggcggcttcggcggccccaccgggctgacctacgacgacaagcgctac
ctgggcaagatcgactggaacatctccaacaaccaccgcgccagcttcacctaccagcgc
accaaggagatgctgccggcggtaggcggcaacagcccgtccagcgtgggcctgaccagc
tacacctacaccaaggcgatcaccaccgacaattacgtcgcgcacgtgttcgacgactgg
accgacaacttctccaccgaggccaaggtcggctaccagaagtacgtgcaggacaccacc
gcaccgttccagcagccggcggtgaacgtcaacctgtcgcccaccggcaaaggcccgtcg
gtgaacctgggcgaggagcgctaccgccactacaaccacatcgacaccaagaagacctcg
gtcttcctggccggcacctatgtcctgggtgaccacgcggtcaagggcggcatcgactac
cagcgcaacaagatcaacaacctgttcggccaggccgagttcggcgtctacaccttctgg
ggcctgaccaacttcgccgccggcaactacaacaagtacgagctgtatcacccggcgccg
ggctacgcgttgaacgacatcgccggcaagtggacctacagccagtacagcccgttcctg
caggacacctggcaggtcaacgacgcgctgtcggtgcagtacggcgtgcgcgtggacatt
ccgcataccagcgacaagccggtctacaacgcggctttcgcgcaggctttcggtttcgcc
aacaactacacggtcggctcctccaaccgcatcgtggagccgcgcctgtcgttcaactac
ctgttcgacagcagctacaagacccagctgcgcggcggcgtgggcctgttccagaccaac
ccgccgacggtgtggatgaccaacccgttccagaacaacggtgtcaccctgcgcaactac
acctcgttcaacccggccagcgcgccgttcagccccgacccgctgcaccagaacatccct
gccggcggcggcgcgggctcgatcgacaccatcgacccgaacttccgcctgcccagcgtg
tggaagatgagcctggcgctggatcgcgagctgccgtggtggggcatgctggcctcggcc
gaataccagcacatcaaggtgcgcgacggcatcctgtacgaggcggtgaactatggcgac
cccaccggcacgctgccggacggccgcctgcagttctggaagacgccgggcgaagcaccc
acgtccaaggatgcgctggccaatcagaaccgcgccttcagcaccgcttccaccttgctc
accaacacccatcgcggcaagtccgacagcctgacgctggcgctggccaagccgttctcg
gacagctggtccggcaatgtcagcctcaccttcaaccatgccaccgacgtcgatccgggc
accgataccatcgcctacaacggctaccagcgcgtggcgcgactcaaccccaacagcaac
ctgctggccacctccaactacaacgtggccaaggtgctgaaggcctcgctgacctggcag
cacgcgttcttcggcgactaccagacgcaggtgtcggcgttctacagcggccacaccggc
ctgccctacacctgggtgttccagaacgatgccaacggcgacagcgtctccggctgggat
ccggcctacatcccgtcggccaacgacccgaaggtggcctacgcgcccggcaccagccag
caggtgatcgaccagttccaggccttcctggccagcgagaaatacctgaaggaccaccgc
ggccagatcgccggccgcaacggcacgcgcaccgcctgggtgaacgagctggacatgagc
ttctcgcaggaagtgcccggcatcttcaagggcaacaagggcgagctgcggctggacgtc
tacaacatgctcaacctgctcaacaagggctggggacagcagcgcaacaccggcatctac
ccgacccgcacgctcgccagctacgccggcgtgaatgcgcagggtcagtacgtgtacacg
ctgcccaccgacaagagcggcaattaccagccacagcagctgcagacctacgacggcggc
ttctacgaccccagccgcgtggtgtcgcgctggtcggccatgctgacgctgcgctacaag
ttctga
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