Rhodanobacter thiooxydans: LRK53_03655
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Entry
LRK53_03655 CDS
T08065
Name
(GenBank) DEAD/DEAH box helicase
Organism
rth
Rhodanobacter thiooxydans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
UJJ55505
LinkDB
All DBs
Position
859400..862417
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AA seq
1005 aa
AA seq
DB search
MQQPDGKPHAAIAPSGDDEALPQAWRRLLAAPKPAVVDEHGVLGFFLEVMPEDGAAFARL
DVAPVLLAVVEHGRHARPVPLDSRHLAQSPLELHEQRLAATMLGLPQSVRKGRSYARLGS
PVGDTLLAEILDTAPCFLGGLAGLRLSRGKSHPLNWHWQLEADGSQRLLPVLPHNQRLLR
IDGLWYLDAECATVGRFDAAVEETRWLELPPLKHEYGRSLRNRLAGSRLATRVPLPQVFD
EVRRSALAPKPVLTLHALTRHVRLAAGTPPLGYARLAFDYAGERLPARGGEPLVRRVRNG
QLVEITRRRAEELSAMEQLERAGLTPGVDTEGLPWDVAETLPDDAWLFPGTGYAGALEVN
TPARWLALRPKLEVENFQVEYAPSFPFEVLEGPVHWYGHAVEDADDHAFDLEIGIELDGE
RHNLLPAVAQALAEHQLNLRPAPNEPEDAVWYAPVDARRRVPVRLKELRGLLAPLAEYLE
KPRRRLHLPRVQAGRLEELTAAMPGDGTLEAAEPLLGFAARLRDAAERASDAVPDGLTVE
LRPYQREGLRWLNALAEAGVGGVLADDMGLGKTLQLITHLLALKQGGALGQPALVVVPTS
LIPNWQAEIARFAPMLRVLTLHGPQRAEEFAQLGAQDIVLTSYALLPRDVVALRRQPFAL
IVLDEAQQVKNPRTQARRALLSLRTSRYVCLTGTPLENHLGELWSQIDLAVPGLLGDEGA
FRRFYRLPIEKQHDEECQQRLNLRIAPFILRRTKAQVARELPPKTEITRRVVLEGRQRDL
YEGLRLSLAEELREVIAQRGIAHSGIVVLDALLKLRQVCCDPRLVKLEAARGVHESAKFE
LLMDMLPALLDEGRKVLLFSQFTGMLKLIAAELDRRRIRYVTLTGDTRDRAEPVQRFQNG
EVPLFLLSLKAGGVGLNLTAADTVIHYDPWWNPAAEAQASDRAHRIGQDKPVFVFRLITS
GTVEERIEQLKERKAELAAAVLEGGGSRERLSFDEGDLDALLAPD
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaccggacgggaaaccccacgccgccatcgcgccatcgggcgatgacgaagcc
ctgccgcaggcatggcggcggctgctggccgcgccgaagccggccgtggtcgacgagcac
ggcgtgctggggtttttcctggaagtgatgccggaggacggcgccgcgttcgcccggctg
gacgtggcgccggtgctgctggcggtggtcgagcacggccgccacgcgcggccggtgccg
ctggacagccggcacctggcgcagtcgccgctcgagctgcacgagcaacgcctggccgcg
accatgctcggcctgccgcagagcgtgcgcaagggccgcagctatgcgcgcctcggcagc
cctgtcggcgacaccctgctggccgagatcctggataccgcgccgtgcttcctcggtggc
ctggccgggctgcggctgtcgcgcggcaagtcgcatccgctcaactggcactggcagctg
gaagcggacggcagccagcgcctgctgccggtgctgccgcacaatcagcgcctgctgcgc
atcgacgggctgtggtacctcgatgccgaatgcgccaccgtgggccgcttcgacgcggcg
gtcgaggaaacccgctggctggagctgccgccgctgaagcacgagtacggccgcagcctg
cgcaatcgcctggccggcagccggctggccacgcgggtgccgttgccgcaggtgttcgat
gaagtgcgccgctcggcgctggcgcccaagcccgtattgaccctgcacgcgctgacccgg
cacgtgcggctggccgccggcacgccaccgctgggctacgcgcggctggccttcgactat
gccggcgagcgcctgcccgcgcgcggcggtgagccgctggtgcggcgcgtgcgcaacggc
cagctggtcgagattacccgccgccgtgccgaggaattgtcggctatggagcagctcgaa
cgcgccggactcacccccggcgtggataccgaaggcttgccgtgggacgtggccgaaacg
ctgcccgacgacgcctggctgttccccggcaccggctacgccggggcgctggaggtcaac
acgccggcacgctggctggcgctgcggccgaaactcgaagtggaaaatttccaggtcgag
tacgcgccgagctttccgttcgaggtgctggaaggtccggtgcactggtacggccacgcg
gtggaagacgccgacgaccacgccttcgacctggaaatcggcatcgagctggacggcgag
cgccacaacctgctgcctgcggtggcgcaggcgctggccgagcaccagctgaacctgcgc
ccggcgcccaacgagccggaagacgcggtgtggtacgcgccggtcgatgcgcgccggcgc
gtgccggtgcgcctgaaggaactgcgcggcctgctggcgccgctggccgagtacctggag
aagccgcgccgcaggttgcacctgccgcgcgtgcaggccggccggttggaggaactcacc
gcggcgatgcccggtgacggcacgctggaggcggccgagccgctgctcggtttcgccgcg
cgcctgcgcgacgccgccgagcgcgccagcgacgcggtgcctgacgggctcaccgtcgag
ctgcgcccgtaccagcgcgaaggtctgcgttggctcaacgcgctggccgaggccggcgtc
ggcggcgtgctggccgacgacatgggcctgggcaaaacgctgcagctgatcacccacctg
ctggcgctgaagcagggcggcgcactgggccagcccgcgctggtggtggtgccgaccagc
ctgatcccgaactggcaggcggagatcgcacgcttcgcgccgatgctgcgcgtgctgacc
ctgcacgggccgcagcgggccgaggagttcgcccagctcggcgcgcaggacatcgtgctg
accagctatgcgctgctgccgcgcgacgtggtcgcgctgcgcagacagccgttcgcgctg
atcgtgctggacgaggcgcagcaggtgaagaacccgcgcacgcaggcgcggcgtgcgctg
ctcagcctgcgcacgtcacgctacgtctgccttaccggaacgccgctggagaaccacctc
ggcgagctgtggtcgcagatcgacctggcggtgcccgggctgctcggcgacgaaggcgcg
ttccgccgcttctatcgcctcccgatcgagaagcagcacgacgaggaatgccagcagcgg
ctgaacctgcgcatcgcgccgttcatcctgcgtcgaaccaaggcacaggtggccagggag
ctgccgccgaagaccgagatcacccgccgcgtggtgctggaaggccgccagcgcgacctc
tacgaaggcctgcggctgtcgctggcggaagaactgcgcgaggtgatcgcgcagcgcggc
atcgcgcactccggcatcgtggtgctggacgcgctgctgaaattgcgccaggtctgctgc
gatccgcggctggtgaaactggaagccgcgcgcggcgtgcacgagtcggccaagttcgag
ctgctgatggacatgctgccggcgctgctcgacgaagggcgcaaggtgctgctgttctcg
cagttcaccggcatgctgaaactgatcgccgccgagctcgaccgccggcgcatccgctac
gtcaccctgaccggcgacacccgcgatcgcgccgaaccggtacagcgcttccagaatggc
gaggtgccgctgttcctgctctcgctgaaggccggcggggtgggcctgaacctcaccgcc
gccgacaccgtgatccactacgacccgtggtggaatcccgccgccgaggcgcaggccagc
gaccgcgcgcaccgcatcggccaggacaagccggtgttcgtgttccgcctgatcacctcg
ggcacggtggaggaacgcatcgagcagctgaaggagcgcaaggccgaactggctgcggcc
gtgctcgaaggcggcggcagccgcgagaggctcagcttcgacgagggcgacctggacgcg
ctgctggcgccggactga
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