Rhodanobacter thiooxydans: LRK53_03735
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Entry
LRK53_03735 CDS
T08065
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rth
Rhodanobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rth03021
]
LRK53_03735 (rpoH)
Transcription machinery [BR:
rth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LRK53_03735 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
UCR_14kD
HTH_10
KORA
Motif
Other DBs
NCBI-ProteinID:
UJJ55521
LinkDB
All DBs
Position
880684..881550
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AA seq
288 aa
AA seq
DB search
MSQALAITPSNLPSVVGSLDAYISAVHRIPVLSQEEEQALSRDYLEEANLAAAKKLVMSH
LRFVVHVARGYSGYGLQLADLIQEGNIGLMKAVKRFDPDQGVRLVSFAVHWIRAEMHEFI
LKNWRIVKVATTKAQRKLFFNLRKSKKRLGWMNAAEVSTVAKDLGVPEATVREMESRLSG
RDIGFEAPVDADDDAKPAPAAFLVDDGADPYQNVADEDYADNQMETLNDALAHLDPRSRD
IIQRRWLDDSSKATLQDLADEYGVSAERIRQIEANAMKKMRGLFATAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagccttggcgatcacccccagcaacctgcccagtgtcgtcggcagtctggac
gcgtacatctccgcggttcaccgcattccggtgctgagccaggaagaggagcaggcgctg
tcgcgcgactacctcgaggaggccaacctggccgccgcgaagaagctggtgatgtcgcat
ctgcgtttcgtggtgcatgtggcgcgcggttactcgggttacggcctgcagctggccgac
ctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgcttcgatcccgaccag
ggcgtgcgcctggtcagcttcgcggtgcactggatccgcgccgagatgcacgagttcatc
ctgaagaactggcgcatcgtgaaggtcgccaccaccaaggcgcagcgcaagctgttcttc
aacctgcgcaagagcaagaagcgcctgggctggatgaatgcggccgaggtgagcaccgtg
gcgaaggacctgggcgtgcccgaggcgaccgtgcgcgagatggagtcgcgcctgtccggc
cgcgacatcggtttcgaggctccggtcgatgccgacgacgacgccaagccggcgccggcg
gcgttcctggtcgacgatggcgccgacccgtaccagaacgtggctgatgaggattacgcc
gacaaccagatggagacgctgaacgatgcactcgcccacctggacccgcgctcgcgcgac
atcatccagcggcgctggctggacgattccagcaaggccacgctgcaggatctggccgac
gaatacggcgtgtccgccgagcgcatccgccagatcgaggcgaacgcgatgaagaagatg
cgcggcctgttcgccacggcggcctga
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